RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SOD3P08294 240 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A15PP0C7V4 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A13PP0C7W8 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A14PP0C7W9 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A24PP0C7X0 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 HIST1H1EP10412 219 aaKnown RBP16.69■□□□□ 0.26
SUDS3-204ENST00000543473 SPAARA0A1B0GVQ0 90 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 COL8A1P27658 744 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 IGLV3-21P80748 117 aaPredicted RBP16.69■□□□□ 0.26
SUDS3-204ENST00000543473 AESQ08117 197 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 A0A087WWC5 75 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 TMEM250H0YL14 139 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 MPDU1O75352 247 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 HIST1H1BP16401 226 aaKnown RBP16.68■□□□□ 0.26
SUDS3-204ENST00000543473 SPINK14Q6IE38 97 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 BPIFA4PQ86YQ2 179 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 ATG101Q9BSB4 218 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 GRIFINA4D1Z8 144 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 ZNF735P0CB33 412 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 MEOX1P50221 254 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 ZNF818PQ6ZRF7 136 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 WIPI2Q9Y4P8 454 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 ANKRD36A6QL64 1941 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 COLCA2A8K830 154 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 IGFBP3P17936 291 aaPredicted RBP16.68■□□□□ 0.26
SUDS3-204ENST00000543473 IFITM10A6NMD0 228 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 MOB3BQ86TA1 216 aa16.68■□□□□ 0.26
SUDS3-204ENST00000543473 RCC1LQ96I51 464 aaKnown RBP16.68■□□□□ 0.26
SUDS3-204ENST00000543473 A6NDN8 102 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 TMEM97Q5BJF2 176 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 WFDC8Q8IUA0 241 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 TRAV38-1A0A0B4J264 116 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 LNP1A1A4G5 178 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 OR1B1Q8NGR6 318 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 NPIPB13A6NJU9 1138 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 NPIPB4C9JG80 1138 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 TNFRSF1AP19438 455 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 PMCHL1Q16048 86 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 SPSB2Q99619 263 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 C5orf52A6NGY3 159 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 ASPHD2Q6ICH7 369 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 OR4A47Q6IF82 309 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 DNASE2BQ8WZ79 361 aa16.67■□□□□ 0.26
SUDS3-204ENST00000543473 PSMG3Q9BT73 122 aaPredicted RBP16.67■□□□□ 0.26
SUDS3-204ENST00000543473 RTTNQ86VV8 2226 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 SYNGR1O43759 233 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 EFEMP2O95967 443 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 HSPB8Q9UJY1 196 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 LRRC37A2A6NM11 1700 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A26D6RGX4 464 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 PRNDQ9UKY0 176 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 NDUFB3O43676 98 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 HLA-DQA1P01909 254 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 ZNF83P51522 516 aa16.66■□□□□ 0.26
SUDS3-204ENST00000543473 LYPD3O95274 346 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 SLX1AQ9BQ83 275 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 PRSS1P07477 247 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 HERPUD1Q15011 391 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 hADV38S2A0JD32 116 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 QTRT1Q9BXR0 403 aaKnown RBP16.65■□□□□ 0.26
SUDS3-204ENST00000543473 TRGV8A0A0C4DH27 118 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 COL10A1Q03692 680 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 LRRC10Q5BKY1 277 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 OR4X1Q8NH49 305 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 VSTM2AQ8TAG5 236 aa16.65■□□□□ 0.26
SUDS3-204ENST00000543473 SCARF2Q96GP6 870 aaPredicted RBP16.65■□□□□ 0.26
SUDS3-204ENST00000543473 PARD6GQ9BYG4 376 aaPredicted RBP16.65■□□□□ 0.26
SUDS3-204ENST00000543473 ZNF137PP52743 207 aa16.64■□□□□ 0.26
SUDS3-204ENST00000543473 IL36RNQ9UBH0 155 aa16.64■□□□□ 0.26
SUDS3-204ENST00000543473 IGKV1D-43A0A0B4J1Z2 117 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 CORTO00230 105 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 TNFRSF9Q07011 255 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 IBA57Q5T440 356 aaKnown RBP16.64■□□□□ 0.25
SUDS3-204ENST00000543473 CYP2G1PQ6ZSU1 146 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 LYZP61626 148 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 KIAA1644Q3SXP7 199 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 SAP30LQ9HAJ7 183 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 SEBOXQ9HB31 216 aaPredicted RBP16.64■□□□□ 0.25
SUDS3-204ENST00000543473 PILRBQ9UKJ0 227 aa16.64■□□□□ 0.25
SUDS3-204ENST00000543473 A0A1W2PR77 199 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 SCGB1C2P0DMR2 95 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 EGR1P18146 543 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 CTAG1AP78358 180 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 GABRA6Q16445 453 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 MIC13Q5XKP0 118 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 OR52L2PQ8NGH6 319 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 FAM117AQ9C073 453 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 J3QR06 171 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 HPRT1P00492 218 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 CRYABP02511 175 aaKnown RBP16.63■□□□□ 0.25
SUDS3-204ENST00000543473 IGKV3-11P04433 115 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 FOLR2P14207 255 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 RIGQ13278 110 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 C10orf113Q5VZT2 155 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 GAL3ST2Q9H3Q3 398 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 CACNA1DQ01668 2161 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 CIDEAO60543 219 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 WNT5AP41221 380 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 NPBWR2P48146 333 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms