RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SLC35A2P78381 396 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 HLA-DRB3P79483 266 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 MRPL51Q4U2R6 128 aaKnown RBP2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 SPIN3Q5JUX0 258 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 CLVS2Q5SYC1 327 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 SCXQ7RTU7 201 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 NAA40Q86UY6 237 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 LINC00304Q8N9R0 145 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 OR8K1Q8NGG5 319 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 MS4A6EQ96DS6 147 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 TBX5Q99593 518 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 PKMYT1Q99640 499 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 VPREB3Q9UKI3 123 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 HHLA2Q9UM44 414 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 ADAMTSL1Q8N6G6 1762 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 CHD1O14646 1710 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 ABCC8Q09428 1581 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 SNAPC4Q5SXM2 1469 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 PLCH2O75038 1416 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 SOGA1O94964 1423 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 MRASO14807 208 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 SYNGR2O43760 224 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 KRT75O95678 551 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 MT-CO2P00403 227 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 IGKV1-17P01599 117 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 RPS12P25398 132 aaKnown RBP2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 CA7P43166 264 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 TSPAN31Q12999 210 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 GNA13Q14344 377 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 DEFB134Q4QY38 66 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 COMMD7Q86VX2 200 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 TVP23CQ96ET8 276 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 MRPS26Q9BYN8 205 aaKnown RBP2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 NKX6-2Q9C056 277 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 EMC3Q9P0I2 261 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 GUCA1BQ9UMX6 200 aa2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 PCYT1BQ9Y5K3 369 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P47-201ENST00000511281 CUX1P39880 1505 aa2.78□□□□□ -1.97
HMGB1P47-201ENST00000511281 KMT2EQ8IZD2 1858 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 COL18A1P39060 1754 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 BRD4O60885 1362 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 THSD7AQ9UPZ6 1657 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 IGKV1D-17A0A075B6S4 117 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 CALB1P05937 261 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 DEFA6Q01524 100 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 ITGB3BPQ13352 177 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 SDIM1Q6ZPB5 146 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 CCDC112Q8NEF3 446 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR1M1Q8NGA1 313 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR10P1Q8NGE3 313 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 C16orf78Q8WTQ4 265 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 TMA16Q96EY4 203 aaKnown RBP2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 SLC35G5Q96KT7 338 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 C11orf1Q9H5F2 150 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 CARHSP1Q9Y2V2 147 aaKnown RBP2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 ALG5Q9Y673 324 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 CLASP1Q7Z460 1538 aa2.77□□□□□ -1.97
HMGB1P47-201ENST00000511281 CRB1P82279 1406 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 COL4A4P53420 1690 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 A0A1W2PNN7 141 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 A8MWP6 167 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 M0R381 172 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 ATP6V0CP27449 155 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 RAB5BP61020 215 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 JOSD1Q15040 202 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 PLPPR5Q32ZL2 321 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 C1orf195Q5TG92 126 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 FAM78BQ5VT40 261 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 TCF24Q7RTU0 167 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 LY6G5BQ8NDX9 201 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 OR2D3Q8NGH3 330 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 CMTM2Q8TAZ6 248 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 ANKRD36BP1Q96IX9 119 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 IGF2BP2-AS1Q96M15 143 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 STACQ99469 402 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 HIGD2AQ9BW72 106 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 SMDT1Q9H4I9 107 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 OTOFQ9HC10 1997 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 WRNQ14191 1432 aaPredicted RBP eCLIP2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 EEA1Q15075 1411 aa2.76□□□□□ -1.97
HMGB1P47-201ENST00000511281 KIF15Q9NS87 1388 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 ERCC6L2Q5T890 1561 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 DHRS12A0PJE2 317 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 IGSF23A1L1A6 192 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 CDS2O95674 445 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 IGLV6-57P01721 117 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 HIST1H1EP10412 219 aaKnown RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 ZNF22P17026 224 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 ZNF7P17097 686 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 NPPCP23582 126 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 PPP1CCP36873 323 aaKnown RBP2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 CTBP2P56545 445 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 TSPEAR-AS2P59090 65 aa2.75□□□□□ -1.97
HMGB1P47-201ENST00000511281 NAA20P61599 178 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms