RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 RAB40CQ96S21 281 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 GRPP07492 148 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 NUFIP2Q7Z417 695 aaKnown RBP11.62□□□□□ -0.55
COL6A2-203ENST00000397763 TMEM105Q8N8V8 129 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 ACTR3CQ9C0K3 210 aaPredicted RBP11.62□□□□□ -0.55
COL6A2-203ENST00000397763 OR51I2Q9H344 312 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 IGHV3-43A0A0B4J1X8 118 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 DEFB108AA8MXU0 73 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 CDIPTO14735 213 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 PDGFBP01127 241 aaPredicted RBP11.62□□□□□ -0.55
COL6A2-203ENST00000397763 IGHV3-43DP0DP04 118 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 RPL23P62829 140 aaKnown RBP11.62□□□□□ -0.55
COL6A2-203ENST00000397763 IL11RAQ14626 422 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 IQCJQ1A5X6 159 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 TMEM256Q8N2U0 113 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 FGFRL1Q8N441 504 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 KCNE4Q8WWG9 221 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 TAF15Q92804 592 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL6A2-203ENST00000397763 WDR61Q9GZS3 305 aaKnown RBP11.62□□□□□ -0.55
COL6A2-203ENST00000397763 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
COL6A2-203ENST00000397763 ANKRD30BLA7E2S9 258 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 PAGE4O60829 102 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 IFNA1P01562 189 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 LRRC75BQ2VPJ9 315 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 FAM78BQ5VT40 261 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 COLCA1Q6ZS62 124 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 RFESDQ8TAC1 157 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 PARLQ9H300 379 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 ZNF391Q9UJN7 358 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 CADP27708 2225 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 TGOLN2O43493 480 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 MT-CO3P00414 261 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 PFN1P07737 140 aaKnown RBP11.61□□□□□ -0.55
COL6A2-203ENST00000397763 CELA3BP08861 270 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 NPSP0C0P6 89 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 MEF2BQ02080 365 aaPredicted RBP11.61□□□□□ -0.55
COL6A2-203ENST00000397763 RIPPLY2Q5TAB7 128 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 TIPARPQ7Z3E1 657 aaKnown RBP11.61□□□□□ -0.55
COL6A2-203ENST00000397763 DRAM1Q8N682 238 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 APOBEC3DQ96AK3 386 aaPredicted RBP11.61□□□□□ -0.55
COL6A2-203ENST00000397763 CEP250Q9BV73 2442 aa11.61□□□□□ -0.55
COL6A2-203ENST00000397763 GCGP01275 180 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 RAB4BP61018 213 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 MRGPRGQ86SM5 289 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 OR1L1Q8NH94 360 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 GRIFINA4D1Z8 144 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 ZG16O60844 167 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 OR2H2O95918 312 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 RPL30P62888 115 aaKnown RBP11.6□□□□□ -0.55
COL6A2-203ENST00000397763 HBG1P69891 147 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 HBG2P69892 147 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 TMEM41BQ5BJD5 291 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 ZNF826PQ6ZT77 177 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 OR52L2PQ8NGH6 319 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 DERL1Q9BUN8 251 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 FAM234AQ9H0X4 552 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 TMEM242Q9NWH2 141 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 TCFL5Q9UL49 500 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 SIT1Q9Y3P8 196 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 ZNF320A2RRD8 509 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 CTXN2P0C2S0 81 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 GFRA1P56159 465 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 OR2T10Q8NGZ9 312 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 CTDSP1Q9GZU7 261 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 TMEM9BQ9NQ34 198 aa11.6□□□□□ -0.55
COL6A2-203ENST00000397763 WNT9BO14905 357 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 DNLZQ5SXM8 178 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 WDR86Q86TI4 376 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 MCEMP1Q8IX19 187 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 RNASEH2CQ8TDP1 164 aaKnown RBP11.59□□□□□ -0.55
COL6A2-203ENST00000397763 MS4A10Q96PG2 267 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 TBX15Q96SF7 602 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 MSL2Q9HCI7 577 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 CACNA1GO43497 2377 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 FFAR4Q5NUL3 377 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 TCF23Q7RTU1 214 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 BEND2Q8NDZ0 799 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 OR5A2Q8NGI9 324 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 OR10G4Q8NGN3 311 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 OR10G9Q8NGN4 311 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 OR10G7Q8NGN6 311 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 MBD3L1Q8WWY6 194 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 POM121L2Q96KW2 1035 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 OR2D2Q9H210 308 aa11.59□□□□□ -0.55
COL6A2-203ENST00000397763 PATZ1Q9HBE1 687 aaKnown RBP11.59□□□□□ -0.55
COL6A2-203ENST00000397763 TNRC18O15417 2968 aaPredicted RBP11.58□□□□□ -0.55
COL6A2-203ENST00000397763 TRAV1-1A0A0B4J248 108 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 NUPR1O60356 82 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 HRASP01112 189 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 ROS1P08922 2347 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 OR3A1P47881 315 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 PSMB3P49720 205 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 PLP2Q04941 152 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 Q8NFD4 153 aa11.58□□□□□ -0.56
COL6A2-203ENST00000397763 APH1AQ96BI3 265 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms