RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 AESQ08117 197 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 LRRC10Q5BKY1 277 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 C10orf113Q5VZT2 155 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 SCGB1D4Q6XE38 83 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 OR10S1Q8NGN2 331 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 ZNF785A8K8V0 405 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 HPRT1P00492 218 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 CYB5R2Q6BCY4 276 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 C9orf40Q8IXQ3 194 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 OR8A1Q8NGG7 326 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 NDUFB3O43676 98 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 LY6G6FQ5SQ64 297 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 BIVMQ86UB2 503 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 LSM10Q969L4 123 aaKnown RBP17.01■□□□□ 0.31
SHANK1-203ENST00000391813 Q96M66 194 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 DNAJC4Q9NNZ3 241 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 GLRX2Q9NS18 164 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 RPRMQ9NS64 109 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 NEUROG3Q9Y4Z2 214 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 SCN3AQ9NY46 2000 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 GNG10P50151 68 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 SLC25A45Q8N413 288 aa17.01■□□□□ 0.31
SHANK1-203ENST00000391813 ZCCHC14Q8WYQ9 949 aaKnown RBP17.01■□□□□ 0.31
SHANK1-203ENST00000391813 FAM186AA6NE01 2351 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17■□□□□ 0.31
SHANK1-203ENST00000391813 LMX1BO60663 402 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 PGLYRP1O75594 196 aaPredicted RBP17■□□□□ 0.31
SHANK1-203ENST00000391813 CCL2P13500 99 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 ERVFRD-1P60508 538 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 RBM14Q96PK6 669 aaKnown RBP17■□□□□ 0.31
SHANK1-203ENST00000391813 DCAF16Q9NXF7 216 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 NFAM1Q8NET5 270 aaPredicted RBP17■□□□□ 0.31
SHANK1-203ENST00000391813 ZNF501Q96CX3 271 aaPredicted RBP17■□□□□ 0.31
SHANK1-203ENST00000391813 A0A1W2PR77 199 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 HERVK_113P61574 105 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 DCAF10Q5QP82 559 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 SSX8Q7RTT4 187 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 Q8WTZ3 238 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 REG4Q9BYZ8 158 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 PILRAQ9UKJ1 303 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 AMY1AP04745 511 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 OR2M3Q8NG83 312 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 PMCHL2Q9BQD1 86 aa17■□□□□ 0.31
SHANK1-203ENST00000391813 NPIPB13A6NJU9 1138 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 NPIPB4C9JG80 1138 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 SYNGR1O43759 233 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 ARL6IP6Q8N6S5 226 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 OR1B1Q8NGR6 318 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 OR4X1Q8NH49 305 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 ZNF721Q8TF20 911 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 CTHRC1Q96CG8 243 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 FGF5P12034 268 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 FHL5Q5TD97 284 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 OPN3Q9H1Y3 402 aaPredicted RBP16.99■□□□□ 0.31
SHANK1-203ENST00000391813 GPR35Q9HC97 309 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 ZNF71Q9NQZ8 489 aaPredicted RBP16.99■□□□□ 0.31
SHANK1-203ENST00000391813 ASXL3Q9C0F0 2248 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 SBF1O95248 1867 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 CDIPTO14735 213 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 IGLV3-19P01714 112 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 THY1P04216 161 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 DOLPP1Q86YN1 238 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 UNC13CQ8NB66 2214 aa16.99■□□□□ 0.31
SHANK1-203ENST00000391813 IGKV1D-42A0A075B6H8 117 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 COLCA2A8K830 154 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 SNCGO76070 127 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 JOSD1Q15040 202 aaPredicted RBP16.98■□□□□ 0.31
SHANK1-203ENST00000391813 MOB3BQ86TA1 216 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 DPRXA6NFQ7 191 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 SRIP30626 198 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 SLC25A47Q6Q0C1 308 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 SFRP2Q96HF1 295 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 RCC1LQ96I51 464 aaKnown RBP16.98■□□□□ 0.31
SHANK1-203ENST00000391813 PEF1Q9UBV8 284 aaKnown RBP16.98■□□□□ 0.31
SHANK1-203ENST00000391813 HLA-DRB1P01911 266 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 SLC35B1P78383 322 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 MIEN1Q9BRT3 115 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 SPRY3O43610 288 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 COL10A1Q03692 680 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 MMD2Q8IY49 270 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 SPSB4Q96A44 273 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 COA4Q9NYJ1 87 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 THYN1Q9P016 225 aa16.98■□□□□ 0.31
SHANK1-203ENST00000391813 FBLL1A6NHQ2 334 aaKnown RBP16.97■□□□□ 0.31
SHANK1-203ENST00000391813 SCTP09683 121 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 BTF3P20290 206 aaKnown RBP16.97■□□□□ 0.31
SHANK1-203ENST00000391813 RNF126Q9BV68 326 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 SRSF9Q13242 221 aaKnown RBP eCLIP16.97■□□□□ 0.31
SHANK1-203ENST00000391813 OR1L1Q8NH94 360 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 TSPAN2O60636 221 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 PSMB2P49721 201 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 LYZP61626 148 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 CEACAM21Q3KPI0 293 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 FGFRL1Q8N441 504 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 SDF2L1Q9HCN8 221 aa16.97■□□□□ 0.31
SHANK1-203ENST00000391813 GRIFINA4D1Z8 144 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 TMEM210A6NLX4 147 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 NPIPB7O75200 414 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 C1QL4Q86Z23 238 aa16.96■□□□□ 0.31
SHANK1-203ENST00000391813 WDYHV1Q96HA8 205 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms