RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 GRIFINA4D1Z8 144 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 DNASE2O00115 360 aaPredicted RBP11.68□□□□□ -0.54
TCF3-201ENST00000262965 RPLP1P05386 114 aaKnown RBP11.68□□□□□ -0.54
TCF3-201ENST00000262965 DCAF10Q5QP82 559 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 TMEM251Q8N6I4 163 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 CHD5Q8TDI0 1954 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 DOCK8Q8NF50 2099 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 J3KRW8 73 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 IGKV3-11P04433 115 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 CDX1P47902 265 aaPredicted RBP11.68□□□□□ -0.54
TCF3-201ENST00000262965 Q1RN00 199 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 NHLRC2Q8NBF2 726 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 OR1P1Q8NH06 330 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 ADTRPQ96IZ2 230 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 GGACTQ9BVM4 153 aa11.68□□□□□ -0.54
TCF3-201ENST00000262965 CCL8P80075 99 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 MUC15Q8N387 334 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 C5orf17Q8NAS9 161 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 DLL3Q9NYJ7 618 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 HEATR1Q9H583 2144 aaKnown RBP11.67□□□□□ -0.54
TCF3-201ENST00000262965 DOCK9Q9BZ29 2069 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 A0A1B0GV90 55 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 PPIHO43447 177 aaKnown RBP11.67□□□□□ -0.54
TCF3-201ENST00000262965 ZG16O60844 167 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 TIAF1O95411 115 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 SRSF3P84103 164 aaKnown RBP11.67□□□□□ -0.54
TCF3-201ENST00000262965 COL10A1Q03692 680 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 TMEM187Q14656 261 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
TCF3-201ENST00000262965 HS3ST3B1Q9Y662 390 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 BDP1A6H8Y1 2624 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 NPIPB9F8W1W9 429 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 DNPH1O43598 174 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 SUCLG1P53597 346 aaKnown RBP11.67□□□□□ -0.54
TCF3-201ENST00000262965 CRIPAKQ8N1N5 446 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
TCF3-201ENST00000262965 IL36RNQ9UBH0 155 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 UFC1Q9Y3C8 167 aa11.67□□□□□ -0.54
TCF3-201ENST00000262965 FAM90A27PA6NNH2 459 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 FXYD3Q14802 87 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 C1orf210Q8IVY1 113 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 SHISA5Q8N114 240 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 FAM222BQ8WU58 562 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 LCTP09848 1927 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 PHF3Q92576 2039 aaKnown RBP11.66□□□□□ -0.54
TCF3-201ENST00000262965 K7ESF4 209 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 CD40P25942 277 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 OR8A1Q8NGG7 326 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 CDX2Q99626 313 aaPredicted RBP11.66□□□□□ -0.54
TCF3-201ENST00000262965 CLEC1BQ9P126 229 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 IGHV3-72A0A0B4J1Y9 119 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 IGHV3-48P01763 117 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 APCSP02743 223 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 PRDX2P32119 198 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 KIR2DS2P43631 304 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 VSTM2AQ8TAG5 236 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 HES7Q9BYE0 225 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 TTTY12Q9BZ98 90 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 IGSF23A1L1A6 192 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 RNF224P0DH78 156 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 OTX1P32242 354 aaPredicted RBP11.66□□□□□ -0.54
TCF3-201ENST00000262965 BRS3P32247 399 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 PPOXP50336 477 aa11.66□□□□□ -0.54
TCF3-201ENST00000262965 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
TCF3-201ENST00000262965 EFNB1P98172 346 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 LY6G6FQ5SQ64 297 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 LEAP2Q969E1 77 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 GDF15Q99988 308 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 PARLQ9H300 379 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 IL19Q9UHD0 177 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 F5H697 171 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 CRYABP02511 175 aaKnown RBP11.65□□□□□ -0.54
TCF3-201ENST00000262965 MELTFP08582 738 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 GAS1P54826 345 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 C10orf113Q5VZT2 155 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 ZBTB34Q8NCN2 500 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 WDR54Q9H977 334 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 SAP30LQ9HAJ7 183 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 NPTNQ9Y639 398 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 WDFY1Q8IWB7 410 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 PRNDQ9UKY0 176 aa11.65□□□□□ -0.54
TCF3-201ENST00000262965 EPOPA6NHQ4 379 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 SMPD2O60906 423 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 SOD3P08294 240 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 COTL1Q14019 142 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 ASPHD2Q6ICH7 369 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 SSX8Q7RTT4 187 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 VKORC1L1Q8N0U8 176 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 ATOH7Q8N100 152 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 SRXN1Q9BYN0 137 aa11.64□□□□□ -0.55
TCF3-201ENST00000262965 DUSP15Q9H1R2 295 aaPredicted RBP11.64□□□□□ -0.55
TCF3-201ENST00000262965 RNF7Q9UBF6 113 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms