RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 BTNL3Q6UXE8 466 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 ZNF573Q86YE8 665 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 PINX1Q96BK5 328 aaKnown RBP15.16■□□□□ 0.02
TRAF4-201ENST00000262395 TGOLN2O43493 480 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 GYPAP02724 150 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 OR4A8P0C604 315 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 NUBP1P53384 320 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 TMPRSS7Q7RTY8 843 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 LRP11Q86VZ4 500 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 OR51I2Q9H344 312 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 PGPEP1LA6NFU8 196 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 DVL1O14640 695 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 IL18BPO95998 194 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 RAB4BP61018 213 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 TNFRSF9Q07011 255 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 Q6P435 159 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 MRPL41Q8IXM3 137 aaKnown RBP15.15■□□□□ 0.02
TRAF4-201ENST00000262395 NDUFAF3Q9BU61 184 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 DDA1Q9BW61 102 aa15.15■□□□□ 0.02
TRAF4-201ENST00000262395 LIN7CQ9NUP9 197 aaKnown RBP15.15■□□□□ 0.02
TRAF4-201ENST00000262395 DSPP15924 2871 aaKnown RBP15.14■□□□□ 0.01
TRAF4-201ENST00000262395 ZG16O60844 167 aa15.14■□□□□ 0.01
TRAF4-201ENST00000262395 RPL30P62888 115 aaKnown RBP15.14■□□□□ 0.01
TRAF4-201ENST00000262395 PLP2Q04941 152 aa15.14■□□□□ 0.01
TRAF4-201ENST00000262395 NUFIP2Q7Z417 695 aaKnown RBP15.14■□□□□ 0.01
TRAF4-201ENST00000262395 RAB24Q969Q5 203 aa15.14■□□□□ 0.01
TRAF4-201ENST00000262395 MT-CO3P00414 261 aa15.14■□□□□ 0.01
TRAF4-201ENST00000262395 MAGEA5P43359 124 aa15.14■□□□□ 0.01
TRAF4-201ENST00000262395 GCSAMLQ5JQS6 135 aa15.14■□□□□ 0.01
TRAF4-201ENST00000262395 MKRN2OSH3BPM6 223 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-201ENST00000262395 CDIPTO14735 213 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 CYC1P08574 325 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 WDR86Q86TI4 376 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 OR1L1Q8NH94 360 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 PRR14LQ5THK1 2151 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 ZNF25P17030 456 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-201ENST00000262395 RELQ04864 619 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-201ENST00000262395 ALKBH6Q3KRA9 238 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 CXorf67Q86X51 503 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-201ENST00000262395 OR2T10Q8NGZ9 312 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 TMEM204Q9BSN7 226 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 OR2D2Q9H210 308 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 HRASP01112 189 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 HNF1AP20823 631 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 NPPCP23582 126 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 LHX2P50458 406 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 FAM78BQ5VT40 261 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 TMEM45BQ96B21 275 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 APH1AQ96BI3 265 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 PYGO2Q9BRQ0 406 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 DERL1Q9BUN8 251 aa15.13■□□□□ 0.01
TRAF4-201ENST00000262395 S1PR2O95136 353 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 MBP02144 154 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 GRPP07492 148 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 COL8A2P25067 703 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 TMEM14EPQ6UXP3 125 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 OR52L2PQ8NGH6 319 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 MAFAQ8NHW3 353 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-201ENST00000262395 PLPPR2Q96GM1 343 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 TRBV6-6A0A0A6YYG2 114 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 A0A0U1RQK1 487 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 SYNGR4O95473 234 aa15.12■□□□□ 0.01
TRAF4-201ENST00000262395 TNRC6AQ8NDV7 1962 aaKnown RBP15.12■□□□□ 0.01
TRAF4-201ENST00000262395 CTXND1A0A1B0GTU2 59 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 ODAMA1E959 279 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 NXPH2O95156 264 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 CD33P20138 364 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 MPLP40238 635 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 OR3A1P47881 315 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 ZNF497Q6ZNH5 498 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 TIPARPQ7Z3E1 657 aaKnown RBP15.11■□□□□ 0.01
TRAF4-201ENST00000262395 SCCPDHQ8NBX0 429 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 C5orf30Q96GV9 206 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 WDYHV1Q96HA8 205 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 CLDN18P56856 261 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 SLC10A1Q14973 349 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 CST9LP1Q5W188 147 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 TPRX1Q8N7U7 411 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 AGMATQ9BSE5 352 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 PILRBQ9UKJ0 227 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 ASPMQ8IZT6 3477 aa15.11■□□□□ 0.01
TRAF4-201ENST00000262395 TRAV38-1A0A0B4J264 116 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 C17orf98A8MV24 154 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 DNLZQ5SXM8 178 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 LINC00696Q6ZRV3 163 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 TMEM170AQ8WVE7 144 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 ACTR3CQ9C0K3 210 aaPredicted RBP15.1■□□□□ 0.01
TRAF4-201ENST00000262395 SIT1Q9Y3P8 196 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 TRIOBPQ9H2D6 2365 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 IGHV3-43A0A0B4J1X8 118 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 C11orf94C9JXX5 98 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 SS18L1O75177 396 aaPredicted RBP15.1■□□□□ 0.01
TRAF4-201ENST00000262395 SCGB1D1O95968 90 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 CELA3BP08861 270 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 IGHV3-43DP0DP04 118 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 TMEM256Q8N2U0 113 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 RNASEH2CQ8TDP1 164 aaKnown RBP15.1■□□□□ 0.01
TRAF4-201ENST00000262395 SDSLQ96GA7 329 aa15.1■□□□□ 0.01
TRAF4-201ENST00000262395 NOL4LQ96MY1 436 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms