RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 OR51H1Q8NH63 302 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 IL22RA2Q969J5 263 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 ABHD14BQ96IU4 210 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 SEC22AQ96IW7 307 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 TMEM56Q96MV1 263 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 ABHD14AQ9BUJ0 271 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 NMES1Q9C002 83 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 TMEM56-RWDD3S4R434 201 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 LRBAP50851 2863 aa9.39□□□□□ -0.91
SMAD4-205ENST00000588745 MPTX1A8MV57 137 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 SLC31A2O15432 143 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 CDS2O95674 445 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 IGHV4-39P01824 125 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 ZNF134P52741 427 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 DLX6P56179 175 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 CYCSP99999 105 aaKnown RBP9.38□□□□□ -0.91
SMAD4-205ENST00000588745 FGL1Q08830 312 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 CATR1Q13166 79 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 Q3ZCU0 254 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 UTF1Q5T230 341 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 SP5Q6BEB4 398 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-205ENST00000588745 ZNF66Q6ZN08 573 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 LYZL2Q7Z4W2 148 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 ZNF695Q8IW36 515 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 C9orf62Q8N4C0 152 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 SLC35G3Q8N808 338 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 DRAXINQ8NBI3 349 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-205ENST00000588745 LEAP2Q969E1 77 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 RAB39BQ96DA2 213 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 OR10C1Q96KK4 312 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 C2orf50Q96LR7 162 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 PATZ1Q9HBE1 687 aaKnown RBP9.38□□□□□ -0.91
SMAD4-205ENST00000588745 SDHAF2Q9NX18 166 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 TMED3Q9Y3Q3 217 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 LRRK2Q5S007 2527 aa9.38□□□□□ -0.91
SMAD4-205ENST00000588745 SPTAN1Q13813 2472 aaKnown RBP9.38□□□□□ -0.91
SMAD4-205ENST00000588745 TRAV14DV4A0A0A6YYC5 116 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 PIGBOS1A0A0B4J2F0 54 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 IGHV3-7P01780 117 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 IAH1Q2TAA2 248 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 CT45A1Q5HYN5 189 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 BTNL3Q6UXE8 466 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 SELENOHQ8IZQ5 122 aaKnown RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 ZNF525Q8N782 197 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 CT45A3Q8NHU0 189 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 C8orf46Q8TAG6 207 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 PPP1R1CQ8WVI7 109 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 RBPMSQ93062 196 aaKnown RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 HSD17B10Q99714 261 aaKnown RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 USF3Q68DE3 2245 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 COL12A1Q99715 3063 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 FXYD6-FXYD2A0A087WZ82 144 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 A0A1W2PPH5 198 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 J3QKU1 62 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 SERPINE2P07093 398 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 ZNF16P17020 682 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 GNG10P50151 68 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 GNB2P62879 340 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 RPL30P62888 115 aaKnown RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 LRRC37A5PQ49AS3 106 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 LAMTOR1Q6IAA8 161 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 SLC25A48Q6ZT89 311 aaKnown RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 TCTEX1D1Q8N7M0 179 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-205ENST00000588745 TCTEX1D2Q8WW35 142 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 NARFLQ9H6Q4 476 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 GAB2Q9UQC2 676 aa9.37□□□□□ -0.91
SMAD4-205ENST00000588745 A0A087X0M5 115 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 SAA2-SAA4A0A096LPE2 208 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 PPIAL4CA0A0B4J2A2 164 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 A0A1B0GX30 115 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 A0A1W2PPE3 182 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 HMSDA8MTL9 139 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 C17orf98A8MV24 154 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 MPC2O95563 127 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 RBP4P02753 201 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 SAA2P0DJI9 122 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-205ENST00000588745 PPIAL4GP0DN37 164 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 IGHV1-8P0DP01 117 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 SLC25A4P12235 298 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 RPA2P15927 270 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 VDAC1P21796 283 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 PSMB6P28072 239 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 DUTP33316 252 aaKnown RBP9.36□□□□□ -0.91
SMAD4-205ENST00000588745 PDLIM4P50479 330 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 ERVFRD-1P60508 538 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 IL15RAQ13261 267 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 ESCO2Q56NI9 601 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 RPL39P5Q59GN2 51 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 NMSQ5H8A3 153 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 ZNF295-AS1Q8N0V1 137 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 C8orf31Q8N9H6 132 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 ZBTB8BQ8NAP8 495 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-205ENST00000588745 SPIN2AQ99865 258 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 SPIN2BQ9BPZ2 258 aa9.36□□□□□ -0.91
SMAD4-205ENST00000588745 SSBP3Q9BWW4 388 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-205ENST00000588745 BARX1Q9HBU1 254 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-205ENST00000588745 PLSCR3Q9NRY6 295 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms