RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MOB1BQ7L9L4 216 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 FAM71E2Q8N5Q1 922 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 RCC1LQ96I51 464 aaKnown RBP10□□□□□ -0.81
NPLOC4-213ENST00000573519 NABP2Q9BQ15 211 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 ZNF251Q9BRH9 671 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 RIMS4Q9H426 269 aaPredicted RBP10□□□□□ -0.81
NPLOC4-213ENST00000573519 RNF167Q9H6Y7 350 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 ZFP57Q9NU63 452 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 SLC23A1Q9UHI7 598 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 ZNF107Q9UII5 783 aaPredicted RBP10□□□□□ -0.81
NPLOC4-213ENST00000573519 RAB22AQ9UL26 194 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 SSR3Q9UNL2 185 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 PLXNB1O43157 2135 aa10□□□□□ -0.81
NPLOC4-213ENST00000573519 HSPA12AO43301 675 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 RPLP1P05386 114 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 CLEC2LP0C7M8 214 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 CNTFRP26992 372 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 FGF9P31371 208 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 RANBP1P43487 201 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 THBS3P49746 956 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 RAB25P57735 213 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 ACTBP60709 375 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 HLA-DRB3P79483 266 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 MOGAT2Q3SYC2 334 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 CXorf66Q5JRM2 361 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 LY6G6FQ5SQ64 297 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 ZNF880Q6PDB4 577 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 LCNL1Q6ZST4 164 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 ZNF833PQ6ZTB9 187 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 ZNF695Q8IW36 515 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 MRPL41Q8IXM3 137 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 OR56B1Q8NGI3 324 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 RITA1Q96K30 269 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 DUX3Q96PT4 197 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 CHCHD6Q9BRQ6 235 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 IFI27L2Q9H2X8 130 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 C12orf4Q9NQ89 552 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 PIPOXQ9P0Z9 390 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 HSF4Q9ULV5 492 aa9.99□□□□□ -0.81
NPLOC4-213ENST00000573519 A0A075B6Q4 140 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 LOC100506127A0A0U1RQW1 187 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 RAB29O14966 203 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 DUS4LO95620 317 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 ZBTB25P24278 435 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 GADD45AP24522 165 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 CEACAM6P40199 344 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 MRPS15P82914 257 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 RPL39P5Q59GN2 51 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 FAM131AQ6UXB0 335 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 ETV3LQ6ZN32 361 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 ABHD14BQ96IU4 210 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 CMSS1Q9BQ75 279 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 PARP12Q9H0J9 701 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 OR1A1Q9P1Q5 309 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 KIAA1456Q9P272 454 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 MGAT4AQ9UM21 535 aa9.98□□□□□ -0.81
NPLOC4-213ENST00000573519 TGP01266 2768 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 PRKDCP78527 4128 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 TRBV6-6A0A0A6YYG2 114 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 NOTOA8MTQ0 251 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 NBR2O15453 112 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 SCTP09683 121 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 GNB3P16520 340 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 CD36P16671 472 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 SLC6A1P30531 599 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 HOXD3P31249 432 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 SDC2P34741 201 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 MYCNOSP40205 109 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 MXD1Q05195 221 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 FOXE3Q13461 319 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 DEFB136Q30KP8 78 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 GLDNQ6ZMI3 551 aaPredicted RBP9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 OR10R2Q8NGX6 335 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 DPF1Q92782 380 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 RAB3CQ96E17 227 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 KCTD7Q96MP8 289 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 Q9N2K0 584 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 PARP11Q9NR21 331 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 DAPK2Q9UIK4 370 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 KCNK7Q9Y2U2 307 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
NPLOC4-213ENST00000573519 H7C2Y5 167 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 RAB27BO00194 218 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 ELANEP08246 267 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 CD3GP09693 182 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 OR5H8P0DN80 308 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 SNRPBP14678 240 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 RAB6AP20340 208 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 PLGLAQ15195 96 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 LIN54Q6MZP7 749 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 FAM71F2Q6NXP2 309 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 TSPAN14Q8NG11 270 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 EDARADDQ8WWZ3 215 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 MAFIPQ8WZ33 124 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 RAX2Q96IS3 184 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 CENPOQ9BU64 300 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 GPR61Q9BZJ8 451 aa9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 C11orf54Q9H0W9 315 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-213ENST00000573519 ATG5Q9H1Y0 275 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms