RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 SLC2A9Q9NRM0 540 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 MALRD1Q5VYJ5 2156 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 NSUN5P1Q3KNT7 163 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 C11orf87Q6NUJ2 197 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 C19orf35Q6ZS72 473 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 OR10V1Q8NGI7 309 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 PELI1Q96FA3 418 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 OR4C12Q96R67 309 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 UQCC1Q9NVA1 299 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 A0A1W2PPV4 95 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 SHISA9B4DS77 424 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 CLDN34H7C241 214 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 GPR31O00270 319 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 TIMM23O14925 209 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 UHRF2Q96PU4 802 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 DSCAMO60469 2012 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 IGHV4-61A0A0C4DH41 118 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 WIPF3A6NGB9 483 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 SDCBPO00560 298 aaPredicted RBP10.56□□□□□ -0.72
LIN54-210ENST00000510877 SLC6A1P30531 599 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 ZNF133P52736 654 aaPredicted RBP10.56□□□□□ -0.72
LIN54-210ENST00000510877 HMGA2P52926 109 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 HBG1P69891 147 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 HBG2P69892 147 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 COL10A1Q03692 680 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 C3orf36Q3SXR2 165 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 MTURNQ8N3F0 131 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 OR10J5Q8NHC4 309 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 R3HDM4Q96D70 268 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 ZNF75AQ96N20 296 aa10.56□□□□□ -0.72
LIN54-210ENST00000510877 GPX7Q96SL4 187 aaPredicted RBP10.56□□□□□ -0.72
LIN54-210ENST00000510877 COL4A2P08572 1712 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 ZNF728P0DKX0 622 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 OR5H8P0DN80 308 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 DDTP30046 118 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 KISS1Q15726 138 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 MPTX1A8MV57 137 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 TAS2R60P59551 318 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 SPCS3P61009 180 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 TOMM20LQ6UXN7 152 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 FAM216BQ8N7L0 139 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 OR13C8Q8NGS7 320 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 OR2G3Q8NGZ4 309 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 OR5R1Q8NH85 324 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 RNF114Q9Y508 228 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 CFAP46Q8IYW2 2715 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 THBS3P49746 956 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 ZNF485Q8NCK3 441 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 DYRK2Q92630 601 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 PACRGQ96M98 296 aaPredicted RBP10.55□□□□□ -0.72
LIN54-210ENST00000510877 ARV1Q9H2C2 271 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 OR51I2Q9H344 312 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 RASL12Q9NYN1 266 aa10.55□□□□□ -0.72
LIN54-210ENST00000510877 ZNF729A6NN14 1252 aaPredicted RBP10.54□□□□□ -0.72
LIN54-210ENST00000510877 IQCF6A8MYZ5 107 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 PLPP2O43688 288 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 TUSC2O75896 110 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 PRSS23O95084 383 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 MMDQ15546 238 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 TMEM155Q4W5P6 130 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 PRSS45Q7RTY3 260 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 CBLN2Q8IUK8 224 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 SNX22Q96L94 193 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 ZNF488Q96MN9 340 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 CLEC7AQ9BXN2 247 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 ZNF727A8MUV8 499 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 TMEM11P17152 192 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 VMA21Q3ZAQ7 101 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 AARDQ4LEZ3 155 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 WDR25Q64LD2 544 aaPredicted RBP10.54□□□□□ -0.72
LIN54-210ENST00000510877 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 IGLV1-36A0A0B4J1U3 117 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 OR4E1P0C645 316 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 SULT1A3P0DMM9 295 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 SULT1A4P0DMN0 295 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 TBPP20226 339 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 FUT3P21217 361 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 LRRTM1Q86UE6 522 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 MSI2Q96DH6 328 aaKnown RBP10.54□□□□□ -0.72
LIN54-210ENST00000510877 MARS2Q96GW9 593 aaKnown RBP10.54□□□□□ -0.72
LIN54-210ENST00000510877 CXorf58Q96LI9 332 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 SLC35B3Q9H1N7 401 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 FGF20Q9NP95 211 aaPredicted RBP10.54□□□□□ -0.72
LIN54-210ENST00000510877 SERTAD4Q9NUC0 356 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 COL6A3P12111 3177 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 GAPDHP04406 335 aaKnown RBP10.54□□□□□ -0.72
LIN54-210ENST00000510877 SRMP19623 302 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 OMGP23515 440 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 MMP16P51512 607 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 IFITM3Q01628 133 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 OR5I1Q13606 314 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 CXorf66Q5JRM2 361 aaPredicted RBP10.54□□□□□ -0.72
LIN54-210ENST00000510877 WDR38Q5JTN6 314 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 PPP1R1CQ8WVI7 109 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 MS4A10Q96PG2 267 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.54□□□□□ -0.72
LIN54-210ENST00000510877 KCNIP2Q9NS61 270 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 EHFQ9NZC4 300 aa10.54□□□□□ -0.72
LIN54-210ENST00000510877 FAM221AA4D161 298 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms