RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZNF295-AS1Q8N0V1 137 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 OR4K15Q8NH41 348 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 HIST1H2BAQ96A08 127 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 MALSU1Q96EH3 234 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 RRNAD1Q96FB5 475 aaKnown RBP12.24□□□□□ -0.45
CXCL12-201ENST00000343575 KIRREL1Q96J84 757 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 TAF9BQ9HBM6 251 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 GPR132Q9UNW8 380 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 HELZ2Q9BYK8 2649 aaKnown RBP12.24□□□□□ -0.45
CXCL12-201ENST00000343575 OOEPA6NGQ2 149 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 NDUFS7O75251 213 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 FCN3O75636 299 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 JTBO76095 146 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 NFYBP25208 207 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 COL8A1P27658 744 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 CDKN1AP38936 164 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 GLP1RP43220 463 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 RBM39Q14498 530 aaKnown RBP12.23□□□□□ -0.45
CXCL12-201ENST00000343575 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 ZNRF1Q8ND25 227 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 NEK7Q8TDX7 302 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 C14orf79Q96F83 325 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 COQ2Q96H96 371 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 Q9N2K0 584 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 CACFD1Q9UGQ2 172 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 KIAA2026Q5HYC2 2103 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 CRYBG3Q68DQ2 2970 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 LRRC30A6NM36 301 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 H0YIZ8 118 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 OVOL3O00110 214 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 MED6O75586 246 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 PMP2P02689 132 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 IRF2P14316 349 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-201ENST00000343575 ZNF880Q6PDB4 577 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 ZFP82Q8N141 532 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 MARCH1Q8TCQ1 289 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 SDSLQ96GA7 329 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 GAFA1Q96PS6 74 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 RAB1BQ9H0U4 201 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 TMEM231Q9H6L2 316 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 NIT2Q9NQR4 276 aa12.23□□□□□ -0.45
CXCL12-201ENST00000343575 DOPEY2Q9Y3R5 2298 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 TRAV39A0A0B4J263 110 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 F12P00748 615 aaPredicted RBP12.22□□□□□ -0.45
CXCL12-201ENST00000343575 GYPAP02724 150 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 ECI1P42126 302 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 GABRA2P47869 451 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 ZNF788Q6ZQV5 615 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 PEG10Q86TG7 708 aaKnown RBP12.22□□□□□ -0.45
CXCL12-201ENST00000343575 ANXA10Q9UJ72 324 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 FAM96BQ9Y3D0 163 aa12.22□□□□□ -0.45
CXCL12-201ENST00000343575 SPG11Q96JI7 2443 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 PPIAL4EA0A075B759 164 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 FAM157AC9JC47 383 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 PPIAL4DF5H284 164 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 K7N7A8 449 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 PPIAL4FP0DN26 164 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 AESQ08117 197 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 IL15RAQ13261 267 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 IGSF11Q5DX21 431 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 Q6ZS49 121 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 CCL13Q99616 98 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 TMPRSS5Q9H3S3 457 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 LIME1Q9H400 295 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 PPIAL4AQ9Y536 164 aa12.21□□□□□ -0.45
CXCL12-201ENST00000343575 FBN2P35556 2912 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.46
CXCL12-201ENST00000343575 MDH2P40926 338 aaKnown RBP12.21□□□□□ -0.46
CXCL12-201ENST00000343575 LPAR6P43657 344 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 TAS2R46P59540 309 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 PAX5Q02548 391 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 RHEBQ15382 184 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 SRSF7Q16629 238 aaKnown RBP eCLIP12.21□□□□□ -0.46
CXCL12-201ENST00000343575 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 DHRS11Q6UWP2 260 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 FGFRL1Q8N441 504 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 FAM216BQ8N7L0 139 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 TPRX1Q8N7U7 411 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 NEU4Q8WWR8 484 aaPredicted RBP12.21□□□□□ -0.46
CXCL12-201ENST00000343575 SNX22Q96L94 193 aa12.21□□□□□ -0.46
CXCL12-201ENST00000343575 RIMS4Q9H426 269 aaPredicted RBP12.21□□□□□ -0.46
CXCL12-201ENST00000343575 METTL8Q9H825 291 aaKnown RBP12.21□□□□□ -0.46
CXCL12-201ENST00000343575 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.46
CXCL12-201ENST00000343575 TRAV38-1A0A0B4J264 116 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 IGHV2-5P01817 119 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 TK1P04183 234 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 SCTP09683 121 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 COX6B1P14854 86 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 MAS1LP35410 378 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 GLIPR1P48060 266 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 RAB5CP51148 216 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 HERPUD1Q15011 391 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 LYPD2Q6UXB3 125 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 C1QL4Q86Z23 238 aa12.2□□□□□ -0.46
CXCL12-201ENST00000343575 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms