RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZNF880Q6PDB4 577 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 Q6ZN92 141 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 MYOFQ9NZM1 2061 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 PNRC1Q12796 327 aaPredicted RBP14.91□□□□□ -0.02
SHANK1-201ENST00000293441 CALHM1Q8IU99 346 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 SBF2Q86WG5 1849 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 IFNL4K9M1U5 179 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 HLA-DRB5Q30154 266 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF738Q8NE65 137 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 OR10J6PQ8NGY7 276 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 RBM38Q9H0Z9 239 aaKnown RBP14.91□□□□□ -0.02
SHANK1-201ENST00000293441 MRPS18AQ9NVS2 196 aaKnown RBP14.91□□□□□ -0.02
SHANK1-201ENST00000293441 SS18L1O75177 396 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-201ENST00000293441 PSMB2P49721 201 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 RGP1Q92546 391 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF735P0CB33 412 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 AWAT1Q58HT5 328 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 HERVK_113P61574 105 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 TMEM183BQ1AE95 376 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 LRP11Q86VZ4 500 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF253O75346 499 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 SNRPEP62304 92 aaKnown RBP14.9□□□□□ -0.02
SHANK1-201ENST00000293441 TWIST1Q15672 202 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 LRRC75BQ2VPJ9 315 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF841Q6ZN19 808 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 LHFPL6Q9Y693 200 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 IGKV3D-15A0A087WSY6 115 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 IGKV3-15P01624 115 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 DHRS11Q6UWP2 260 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 WFDC6Q9BQY6 131 aa14.9□□□□□ -0.02
SHANK1-201ENST00000293441 CCDC88CQ9P219 2028 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 IGHV1-69-2A0A0G2JMI3 117 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 PITX3O75364 302 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 SCGB1D4Q6XE38 83 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 ST6GAL2Q96JF0 529 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 MAP1LC3CQ9BXW4 147 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 CALYQ9NYX4 217 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 LOC389332A0A1B0GUA5 103 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 TCTEX1D1Q8N7M0 179 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 NPVFQ9HCQ7 196 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 DLL1O00548 723 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 PTX4Q96A99 478 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 OPN4Q9UHM6 478 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 IGLV1-36A0A0B4J1U3 117 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 NDUFA2O43678 99 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 PTBP3O95758 552 aaKnown RBP14.89□□□□□ -0.03
SHANK1-201ENST00000293441 HIST3H3Q16695 136 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 SIGLEC12Q96PQ1 595 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 PXMP4Q9Y6I8 212 aa14.89□□□□□ -0.03
SHANK1-201ENST00000293441 CTXND1A0A1B0GTU2 59 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 SMIM10L1P0DMW3 83 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 MUC15Q8N387 334 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 ISOC2Q96AB3 205 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 SMIM10Q96HG1 83 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 PLAUP00749 431 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 FSTP19883 344 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 CLDN18P56856 261 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 ABHD12Q8N2K0 398 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 TIMP4Q99727 224 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 TLNRD1Q9H1K6 362 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 MTCL1Q9Y4B5 1905 aaKnown RBP14.88□□□□□ -0.03
SHANK1-201ENST00000293441 OR10J1P30954 320 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 RPL8P62917 257 aaKnown RBP14.88□□□□□ -0.03
SHANK1-201ENST00000293441 PPP1R32Q7Z5V6 425 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 MYOZ3Q8TDC0 251 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 DCTN5Q9BTE1 182 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 IL36RNQ9UBH0 155 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 RCC1P18754 421 aaPredicted RBP14.88□□□□□ -0.03
SHANK1-201ENST00000293441 SCMH1Q96GD3 660 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 SPSB2Q99619 263 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 LRRC37AA6NMS7 1700 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 SLC25A17O43808 307 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 TMEM78Q5T7P6 136 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 OR4C5Q8NGB2 326 aa14.88□□□□□ -0.03
SHANK1-201ENST00000293441 A0A1W2PS18 150 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 ODAMA1E959 279 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 HOXB1P14653 301 aaPredicted RBP14.87□□□□□ -0.03
SHANK1-201ENST00000293441 HIST1H1BP16401 226 aaKnown RBP14.87□□□□□ -0.03
SHANK1-201ENST00000293441 ATP6V0CP27449 155 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 ACSF3Q4G176 576 aaPredicted RBP14.87□□□□□ -0.03
SHANK1-201ENST00000293441 PCSK4Q6UW60 755 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 OR8A1Q8NGG7 326 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 DLL3Q9NYJ7 618 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 DEDDO75618 318 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 RBKSQ9H477 322 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 H0Y980 276 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 IER3P46695 156 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 hCG_38984A0A1B0GV85 526 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 SYNGR3O43761 229 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 APCSP02743 223 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 REG1AP05451 166 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 PGA5P0DJD9 388 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 KIR2DL2P43627 348 aaPredicted RBP14.87□□□□□ -0.03
SHANK1-201ENST00000293441 PPOXP50336 477 aa14.87□□□□□ -0.03
SHANK1-201ENST00000293441 NUP37Q8NFH4 326 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 GPX7Q96SL4 187 aaPredicted RBP14.86□□□□□ -0.03
SHANK1-201ENST00000293441 PRO1933Q9H354 126 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 KCNE5Q9UJ90 142 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 UBE2L6O14933 153 aa14.86□□□□□ -0.03
SHANK1-201ENST00000293441 CENPVQ7Z7K6 275 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms