RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 MANBALQ9NQG1 85 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 ATP23Q9Y6H3 246 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 COL4A4P53420 1690 aaPredicted RBP9.06□□□□□ -0.96
USB1-212ENST00000566082 SOD3P08294 240 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 RAB4AP20338 218 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 OR10G8Q8NGN5 311 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 ZNF581Q9P0T4 197 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 CLEC1BQ9P126 229 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 FOXD3Q9UJU5 478 aaPredicted RBP9.06□□□□□ -0.96
USB1-212ENST00000566082 SIT1Q9Y3P8 196 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 MYO7BQ6PIF6 2116 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 TMEM30CPA0ZSE6 113 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 IGHEP01854 428 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 CSRP1P21291 193 aaKnown RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 GPX4P36969 197 aaPredicted RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 HNRNPA3P51991 378 aaKnown RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 CASP6P55212 293 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 FGF12P61328 243 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 CTAG1AP78358 180 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 OR5I1Q13606 314 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 PRR27Q6MZM9 219 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 TUSC5Q8IXB3 177 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 SSMEM1Q8WWF3 244 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 PHF7Q9BWX1 381 aaPredicted RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 PARLQ9H300 379 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 AKIRIN1Q9H9L7 192 aaPredicted RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 SLC35D1Q9NTN3 355 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 PLA2G3Q9NZ20 509 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 PRUNE2Q8WUY3 3088 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 M0R1X1 148 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 HSBP1O75506 76 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 NDUFB4O95168 129 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 CER1O95813 267 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 CFPP27918 469 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 COL10A1Q03692 680 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 SSX7Q7RTT5 188 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 C5orf24Q7Z6I8 188 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 LURAP1LQ8IV03 231 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 TMEM183AQ8IXX5 376 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 SLC25A45Q8N413 288 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 OR5D13Q8NGL4 314 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 CISD1Q9NZ45 108 aaKnown RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 CLCF1Q9UBD9 225 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 SRSF10O75494 262 aaKnown RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 NDUFB7P17568 137 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 MPLP40238 635 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 THBS3P49746 956 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 STARD6P59095 220 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 SPINK14Q6IE38 97 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 MOB1BQ7L9L4 216 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 CYYR1Q96J86 154 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 ELOVL1Q9BW60 279 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 GLRX2Q9NS18 164 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 KLF2Q9Y5W3 355 aaPredicted RBP9.05□□□□□ -0.96
USB1-212ENST00000566082 KIAA1671Q9BY89 1806 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 WDR87Q6ZQQ6 2873 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 COL4A3Q01955 1670 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 OR5B21A6NL26 309 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 GCGP01275 180 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 OR10J1P30954 320 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 C3AR1Q16581 482 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 ATP6V1FQ16864 119 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 RAB24Q969Q5 203 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 C18orf12Q96KH6 178 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 TAAR6Q96RI8 345 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 SRD5A3Q9H8P0 318 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 TINAGQ9UJW2 476 aa9.05□□□□□ -0.96
USB1-212ENST00000566082 TRIOBPQ9H2D6 2365 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 A0A087WWC5 75 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 IGHV5-10-1A0A0J9YXX1 117 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 CD46P15529 392 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 RANP62826 216 aaKnown RBP9.04□□□□□ -0.96
USB1-212ENST00000566082 C10orf91Q5T1B1 145 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 DEFB108BQ8NET1 73 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 OR4X1Q8NH49 305 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 IL36RNQ9UBH0 155 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 ROS1P08922 2347 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 FRMPD3Q5JV73 1810 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 IGKV1D-13A0A0B4J2D9 117 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 IGKV1-13P0DP09 117 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 IER3P46695 156 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 DAZAP1Q96EP5 407 aaKnown RBP9.04□□□□□ -0.96
USB1-212ENST00000566082 ABHD14BQ96IU4 210 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 S1PR3Q99500 378 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 P2RX4Q99571 388 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 SRXN1Q9BYN0 137 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 HS3ST3B1Q9Y662 390 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 DOCK8Q8NF50 2099 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 NCOR1O75376 2440 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 GRIFINA4D1Z8 144 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 PROB1E7EW31 1015 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 LYL1P12980 280 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 TAS2R60P59551 318 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 VAMP3Q15836 100 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 FGFRL1Q8N441 504 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 SPEM1Q8N4L4 309 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 OR5A2Q8NGI9 324 aa9.04□□□□□ -0.96
USB1-212ENST00000566082 SPTA1P02549 2419 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms