RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ORMDL2Q53FV1 153 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 GLCCI1Q86VQ1 547 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 BMPERQ8N8U9 685 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 IL17DQ8TAD2 202 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 SCAMP4Q969E2 229 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 SPCS1Q9Y6A9 102 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TRAV20A0A0B4J274 112 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 LOC107986453A0A1B0GWG9 222 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TSPAN2O60636 221 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TMEM95Q3KNT9 176 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 C2orf83Q53S99 150 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 PTCRAQ6ISU1 281 aaPredicted RBP4.78□□□□□ -1.64
USF3-202ENST00000478658 ZDHHC24Q6UX98 284 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 C15orf39Q6ZRI6 1047 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 CENPVQ7Z7K6 275 aaPredicted RBP4.78□□□□□ -1.64
USF3-202ENST00000478658 CLEC14AQ86T13 490 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 BIVMQ86UB2 503 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 FAM89BQ8N5H3 189 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 CACNG8Q8WXS5 425 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 MARS2Q96GW9 593 aaKnown RBP4.78□□□□□ -1.64
USF3-202ENST00000478658 PDLIM5Q96HC4 596 aaKnown RBP4.78□□□□□ -1.64
USF3-202ENST00000478658 PLSCR2Q9NRY7 297 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 IL17BQ9UHF5 180 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 SMPXQ9UHP9 88 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 TOGARAM1Q9Y4F4 1720 aa4.78□□□□□ -1.64
USF3-202ENST00000478658 CTXND1A0A1B0GTU2 59 aa4.78□□□□□ -1.65
USF3-202ENST00000478658 GFYI3L273 518 aa4.78□□□□□ -1.65
USF3-202ENST00000478658 GPR25O00155 361 aa4.78□□□□□ -1.65
USF3-202ENST00000478658 TNFSF15O95150 251 aa4.78□□□□□ -1.65
USF3-202ENST00000478658 INO80CQ6PI98 192 aaPredicted RBP4.78□□□□□ -1.65
USF3-202ENST00000478658 TTC9CQ8N5M4 171 aa4.78□□□□□ -1.65
USF3-202ENST00000478658 ARIH2OSQ8N7S6 290 aa4.78□□□□□ -1.65
USF3-202ENST00000478658 PARD6GQ9BYG4 376 aaPredicted RBP4.78□□□□□ -1.65
USF3-202ENST00000478658 DOCK3Q8IZD9 2030 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 JMJD7-PLA2G4BH0Y9G9 81 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 WNT7AO00755 349 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 EIF3GO75821 320 aaKnown RBP eCLIP4.77□□□□□ -1.65
USF3-202ENST00000478658 CST3P01034 146 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 IAPPP10997 89 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 Q7L0L9 218 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 PTP4A1Q93096 173 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 SNHG12Q9BXW3 62 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 RNF7Q9UBF6 113 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 HES2Q9Y543 173 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 TRAV27A0A087WT01 109 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 TRAV41A0A0B4J266 112 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 MYBPHLA2RUH7 354 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 PPBPP02775 128 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 NPPCP23582 126 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 CA7P43166 264 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 MRPL24Q96A35 216 aaKnown RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 IKZF4Q9H2S9 585 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 HINT3Q9NQE9 182 aaKnown RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 ITGB1BP1O14713 200 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 HOXB3P14651 431 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 CTLA4P16410 223 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 EVI2AP22794 236 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 CST5P28325 142 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 CLDN10P78369 228 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 PCLAFQ15004 111 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 IGSF11Q5DX21 431 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 STHQ8IWL8 128 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 TCEAL8Q8IYN2 117 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 CLDND2Q8NHS1 167 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 PPP1R1CQ8WVI7 109 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 NPIPB3Q92617 1050 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 ZNF414Q96IQ9 312 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 DUX3Q96PT4 197 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 C4AP0C0L4 1744 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 C4BP0C0L5 1744 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 PXDNQ92626 1479 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 H0YGG7 62 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 M0R2P5 195 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 SPRY3O43610 288 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 ARSAP15289 507 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 ATP6V0CP27449 155 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 HLA-DRB3P79483 266 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 ATG4DQ86TL0 474 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 SDHCQ99643 169 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 AKIRIN1Q9H9L7 192 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 SEMA5BQ9P283 1151 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 MTFP1Q9UDX5 166 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 PCOLCE2Q9UKZ9 415 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 LAMB4A4D0S4 1761 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 TAF1P21675 1872 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 TNRC6AQ8NDV7 1962 aaKnown RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 PEX11BO96011 259 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 INSM1Q01101 510 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 BEX5Q5H9J7 111 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 Q6ZVL8 140 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 STPG2Q8N412 459 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 PIK3C2AO00443 1686 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 DOPEY2Q9Y3R5 2298 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 TRAV8-2A0A0B4J237 113 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 SFT2D2O95562 160 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 F12P00748 615 aaPredicted RBP4.77□□□□□ -1.65
USF3-202ENST00000478658 CTAG1AP78358 180 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 ZNF506Q5JVG8 444 aa4.77□□□□□ -1.65
USF3-202ENST00000478658 LRP10Q7Z4F1 713 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms