RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 SVOPQ8N4V2 548 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 SETD6Q8TBK2 473 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 MRAPQ8TCY5 172 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 IL1F10Q8WWZ1 152 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 CNBD2Q96M20 576 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 MGLLQ99685 303 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 RASL11BQ9BPW5 248 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 HSPB9Q9BQS6 159 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 MRPL20Q9BYC9 149 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 LPAR5Q9H1C0 372 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 CHMP1AQ9HD42 196 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 ISYNA1Q9NPH2 558 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 SLC17A2O00624 439 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 YPEL1O60688 119 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 NAPSAO96009 420 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 CALRP27797 417 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 OR3A3P47888 321 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 CLDN12P56749 244 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 LCNL1Q6ZST4 164 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 PRSS48Q7RTY5 328 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 FAM71E2Q8N5Q1 922 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 LINC00482Q8N8I6 264 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 KLHL30-AS1Q8NEE0 82 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 YPEL2Q96QA6 119 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 HDHD3Q9BSH5 251 aaPredicted RBP12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 VCX3BQ9H321 246 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 PLEKHJ1Q9NW61 149 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 ABRACLQ9P1F3 81 aa12.94□□□□□ -0.34
NCKIPSD-208ENST00000454134 ARL6IP5O75915 188 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 SLC2A2P11168 524 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 ARSBP15848 533 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 THBS3P49746 956 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 TRAM1Q15629 374 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 RAB11BQ15907 218 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 MRPL41Q8IXM3 137 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 COMMD1Q8N668 190 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 OR2AK2Q8NG84 335 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 OR51D1Q8NGF3 324 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 OR8H1Q8NGG4 311 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 RITA1Q96K30 269 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 DUX3Q96PT4 197 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 NABP2Q9BQ15 211 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 URM1Q9BTM9 101 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 PARP12Q9H0J9 701 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 ZFP57Q9NU63 452 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 AK3Q9UIJ7 227 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
NCKIPSD-208ENST00000454134 SAA2-SAA4A0A096LPE2 208 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 ST8SIA5O15466 376 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 RGS11O94810 467 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 RPLP1P05386 114 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 SAA2P0DJI9 122 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 PSMA1P25786 263 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 CNTFRP26992 372 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 SOX6P35712 828 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 MMDQ15546 238 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 ZNF880Q6PDB4 577 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 TEX38Q6PEX7 206 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 ZNF833PQ6ZTB9 187 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 RCC1LQ96I51 464 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 IFI27L2Q9H2X8 130 aa12.92□□□□□ -0.34
NCKIPSD-208ENST00000454134 HOXD3P31249 432 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 HSPA13P48723 471 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 VEGFCP49767 419 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 ACTBP60709 375 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 PLA2G7Q13093 441 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 SSX1Q16384 188 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 PNLIPRP3Q17RR3 467 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 LY6G6FQ5SQ64 297 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 ZNF695Q8IW36 515 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 FAM89BQ8N5H3 189 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 STEAP1Q9UHE8 339 aa12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 ZNF107Q9UII5 783 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-208ENST00000454134 FOXI3A8MTJ6 420 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 RRP9O43818 475 aaKnown RBP12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 TMEM50BP56557 158 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 KRTAP10-11P60412 298 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 TBCEQ15813 527 aaPredicted RBP12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 C2orf76Q3KRA6 126 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 RPL39P5Q59GN2 51 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 HES5Q5TA89 166 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 ARHGAP5-AS1Q96IT6 56 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 GON7Q9BXV9 100 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 OR1A1Q9P1Q5 309 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 V9GY05 133 aa12.9□□□□□ -0.34
NCKIPSD-208ENST00000454134 TRBV6-6A0A0A6YYG2 114 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 DUS4LO95620 317 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 SCTP09683 121 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 VDAC1P21796 283 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 MYCNOSP40205 109 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 OR10A3P58181 314 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 HLA-DRB3P79483 266 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 CFHR3Q02985 330 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 FOXE3Q13461 319 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 DEFB136Q30KP8 78 aa12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 CXorf66Q5JRM2 361 aaPredicted RBP12.89□□□□□ -0.35
NCKIPSD-208ENST00000454134 FAM131AQ6UXB0 335 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms