RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Tnfrsf17O88472 185 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Agtr1aP29754 359 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Fosl1P48755 273 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Sult2a2P50236 285 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr125Q14AJ9 320 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Hhipl1Q14DK5 791 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 N4bp2l1Q3V2Q8 238 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gnb3Q61011 340 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Lcn3Q62471 182 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Kazald1Q8BJ66 313 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 S1pr5Q91X56 400 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 3100002H09RikQ9CXW6 140 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 S100a16Q9D708 124 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 AplfQ9D842 499 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Fzr1Q9R1K5 493 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rarres1F6ZIS7 283 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr64F8VPZ8 307 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Slc38a6G3UVW3 457 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm3532M0QWL4 194 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Egr3P43300 387 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Atp4bP50992 294 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tspan5P62080 268 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Masp1P98064 704 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Psg26Q4KL65 475 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tmed3Q78IS1 221 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 SrrdQ8K2M3 249 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Cisd2Q9CQB5 135 aaKnown RBP12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Atg12Q9CQY1 141 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 DnlzQ9D113 177 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr951Q9EQ94 314 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Defb3Q9WTL0 63 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 AireQ9Z0E3 552 aa12.68□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm5286E0CXI6 357 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Sp100O35892 482 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 GzmbP04187 247 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Npbwr1P49681 329 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vmn1r181Q0P547 304 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1507Q0VEP0 313 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Sat2Q6P8J2 170 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Coq3Q8BMS4 370 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tssk5Q8C1R0 372 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vmn1r4Q8R2D3 297 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Dnajc24Q91ZF0 196 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tmem218Q9CQ44 115 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 4930412O13RikQ9D5M9 106 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr878Q9EQA9 314 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1039A2ARY0 319 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm20708H3BKF4 155 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm3727J3QM54 205 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Hist1h1dP43277 221 aaKnown RBP12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tacr3P47937 452 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Defa14P50712 85 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Galr1P56479 348 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rasd2P63032 266 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr93Q6UAH1 312 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Mtch1Q791T5 389 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Nupl2Q8CIC2 420 aaKnown RBP12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1238Q8VG59 315 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Elovl6Q920L5 267 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr155Q9QZ22 319 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Syngr4Q9Z1L2 233 aa12.67□□□□□ -0.38
Nup88-202ENSMUST00000108530 Igkv1-135A0A0B4J1H7 120 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr548-ps1A0A1B0GSG0 314 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Pom121l12A0A1B0GSJ4 278 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vmn1r124D3YTX4 307 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 St8sia2O35696 375 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Slc28a2O88627 660 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Amy1P00687 511 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Hnf1aP22361 628 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Foxa3P35584 353 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Kcng3P59053 433 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ppp1cbP62141 327 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ufd1P70362 307 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Hs3st6Q5GFD5 342 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Fam57aQ5ND56 257 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Dio1Q61153 257 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Fbxo27Q6DIA9 280 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Paqr7Q80ZE4 345 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Arfrp1Q8BXL7 201 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gfod2Q9CYH5 385 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Fancd2osQ9D4K4 178 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Dkkl1Q9QZL9 230 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1264Q9R0K2 308 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr623E9Q382 317 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Slc17a3G3UWD9 498 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 IfnabL7MTU6 190 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Klf9O35739 244 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 March1Q6NZQ8 289 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ovch2Q7M761 609 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Bdh1Q80XN0 343 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 TMEM229BQ8BFQ2 167 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vash1Q8C1W1 375 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rft1Q8C3B8 541 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gtf3aQ8VHT7 364 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vmn1r41Q9EQ44 310 aa12.66□□□□□ -0.38
Nup88-202ENSMUST00000108530 Kiaa1549Q68FD9 1940 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm10376D3YXI8 184 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Cpsf4lE9Q2N0 280 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp961E9Q4R5 444 aa12.65□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm4181E9Q7X3 184 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms