RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RNF167Q9H6Y7 350 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 KCNIP1Q9NZI2 227 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 OOSP1A8MZH6 123 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 SDCBPO00560 298 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 NAPSAO96009 420 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 SLC2A2P11168 524 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 PLA2G7Q13093 441 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 C8orf31Q8N9H6 132 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 MRAPQ8TCY5 172 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 PECRQ9BY49 303 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 TAF9BQ9HBM6 251 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 ABCB10Q9NRK6 738 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 GFOD1Q9NXC2 390 aa12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 AMMECR1Q9Y4X0 333 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-206ENST00000549139 TRBV6-6A0A0A6YYG2 114 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 SMIM30A4D0T7 59 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 METTL21EPA6NDL7 271 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 AIREO43918 545 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 HBZP02008 142 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 RAB13P51153 203 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 EFNB2P52799 333 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 LY6EQ16553 131 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 DHRS7BQ6IAN0 325 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 SFXN4Q6P4A7 337 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 ZNF880Q6PDB4 577 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 LIAT1Q6ZQX7 453 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 UBALD1Q8TB05 177 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 LEAP2Q969E1 77 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 ARHGAP5-AS1Q96IT6 56 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 RAB18Q9NP72 206 aa12.62□□□□□ -0.39
CHMP1A-206ENST00000549139 A0A0B4J203 849 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 RAB27BO00194 218 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 TMEM127O75204 238 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 IGHV3-7P01780 117 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 CLEC2LP0C7M8 214 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 BRS3P32247 399 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 ARHGDIBP52566 201 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 HTD2P86397 168 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 MXD1Q05195 221 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 HERPUD1Q15011 391 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 HMGN3Q15651 99 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 PLAC9Q5JTB6 97 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 TPTE2P1Q5T6R2 138 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 CCDC144NLQ6NUI1 221 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 PRR18Q8N4B5 295 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 OR10R2Q8NGX6 335 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 OR1L1Q8NH94 360 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 AK3Q9UIJ7 227 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 DAPK2Q9UIK4 370 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 PITPNC1Q9UKF7 332 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 TCF19Q9Y242 345 aa12.61□□□□□ -0.39
CHMP1A-206ENST00000549139 IGHV3-43A0A0B4J1X8 118 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 A6NDX4 124 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 SMIM18P0DKX4 95 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 IGHV3-43DP0DP04 118 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 GNG10P50151 68 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 SCAND1P57086 179 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 MOGAT2Q3SYC2 334 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 VAX1Q5SQQ9 334 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 STEAP3Q658P3 488 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 CCBE1Q6UXH8 406 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 CFHR4Q92496 578 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 RPEQ96AT9 228 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 GALMQ96C23 342 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 RAB3CQ96E17 227 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 CMSS1Q9BQ75 279 aaKnown RBP12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 OCSTAMPQ9BR26 566 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 CHMP1AQ9HD42 196 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 OR2S2Q9NQN1 319 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 GNG12Q9UBI6 72 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 MGAT4AQ9UM21 535 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 KCNK7Q9Y2U2 307 aa12.6□□□□□ -0.39
CHMP1A-206ENST00000549139 A0A1W2PPE3 182 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 MNDAP41218 407 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 MORN2Q502X0 79 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 OXLD1Q5BKU9 147 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 LY6G6FQ5SQ64 297 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 MOB1BQ7L9L4 216 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 CROCCP3Q8IVE0 287 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 OR13F1Q8NGS4 319 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 OR10X1Q8NGY0 326 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 FUNDC2Q9BWH2 189 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 ATG5Q9H1Y0 275 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 ABRACLQ9P1F3 81 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 JPT1Q9UK76 154 aa12.59□□□□□ -0.39
CHMP1A-206ENST00000549139 YPEL1O60688 119 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 SNRPBP14678 240 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 RAB7AP51149 207 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 ZNF134P52741 427 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 ARL6IP1Q15041 203 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 IDNKQ5T6J7 187 aa12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 FAM53AQ6NSI3 398 aaPredicted RBP12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 SLC25A48Q6ZT89 311 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-206ENST00000549139 C5orf24Q7Z6I8 188 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms