RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZNF729A6NN14 1252 aaPredicted RBP16.84■□□□□ 0.29
SUDS3-204ENST00000543473 WDR74Q6RFH5 385 aaPredicted RBP16.84■□□□□ 0.29
SUDS3-204ENST00000543473 HSPB9Q9BQS6 159 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 TMEM191AQ9H0A3 160 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 PRF1P14222 555 aa16.83■□□□□ 0.29
SUDS3-204ENST00000543473 DMWDQ09019 674 aa16.83■□□□□ 0.29
SUDS3-204ENST00000543473 HSD17B10Q99714 261 aaKnown RBP16.83■□□□□ 0.29
SUDS3-204ENST00000543473 CCL4P13236 92 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 PSG5Q15238 335 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 D2HGDHQ8N465 521 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 C11orf42Q8N5U0 333 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 OR5D13Q8NGL4 314 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 ZNF385AQ96PM9 386 aaKnown RBP16.83■□□□□ 0.28
SUDS3-204ENST00000543473 OR2H1Q9GZK4 316 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 CACNA1EQ15878 2313 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 PRSS3P2Q8NHM4 247 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 SPTBN2O15020 2390 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 OTOFQ9HC10 1997 aa16.83■□□□□ 0.28
SUDS3-204ENST00000543473 HTR1DP28221 377 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 SUCLG1P53597 346 aaKnown RBP16.82■□□□□ 0.28
SUDS3-204ENST00000543473 GAS1P54826 345 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 HOXB1P14653 301 aaPredicted RBP16.82■□□□□ 0.28
SUDS3-204ENST00000543473 G6PCP35575 357 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 P2RX4Q99571 388 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 TECRQ9NZ01 308 aaKnown RBP16.82■□□□□ 0.28
SUDS3-204ENST00000543473 PLA2G3Q9NZ20 509 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 TIMM9Q9Y5J7 89 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
SUDS3-204ENST00000543473 OR5AL1P0C617 328 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 FAM157CP0CG43 387 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 SRP14P37108 136 aaKnown RBP16.82■□□□□ 0.28
SUDS3-204ENST00000543473 UBE2L3P68036 154 aaKnown RBP16.82■□□□□ 0.28
SUDS3-204ENST00000543473 BCL2L2Q92843 193 aaPredicted RBP16.82■□□□□ 0.28
SUDS3-204ENST00000543473 MOB3AQ96BX8 217 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 ABHD14BQ96IU4 210 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 CD99P14209 185 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 SMIM8Q96KF7 97 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 TRPM7Q96QT4 1865 aa16.82■□□□□ 0.28
SUDS3-204ENST00000543473 DHRS7CA6NNS2 312 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 OR2M3Q8NG83 312 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 HELTA6NFD8 242 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 TSPAN2O60636 221 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 IGHV3-13P01766 116 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 IGHV3-7P01780 117 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 CHRNB4P30926 498 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 TRIP6Q15654 476 aaKnown RBP16.81■□□□□ 0.28
SUDS3-204ENST00000543473 LY6G6FQ5SQ64 297 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 TMEM56Q96MV1 263 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 CNOT1A5YKK6 2376 aaKnown RBP16.81■□□□□ 0.28
SUDS3-204ENST00000543473 BRS3P32247 399 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 OPRK1P41145 380 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 TRAT1Q6PIZ9 186 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 NHLRC2Q8NBF2 726 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 OR10AD1Q8NGE0 317 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 BARX1Q9HBU1 254 aaPredicted RBP16.81■□□□□ 0.28
SUDS3-204ENST00000543473 CBLN4Q9NTU7 201 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 TMEM38BQ9NVV0 291 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 ADAM11O75078 769 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 SLC25A28Q96A46 364 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 SARAFQ96BY9 339 aa16.81■□□□□ 0.28
SUDS3-204ENST00000543473 EP300Q09472 2414 aaPredicted RBP16.81■□□□□ 0.28
SUDS3-204ENST00000543473 SRSF10O75494 262 aaKnown RBP16.8■□□□□ 0.28
SUDS3-204ENST00000543473 EGR4Q05215 589 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 RNPS1Q15287 305 aaKnown RBP16.8■□□□□ 0.28
SUDS3-204ENST00000543473 OR1A1Q9P1Q5 309 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 CLN8Q9UBY8 286 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 HES3Q5TGS1 186 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 TGIF2LXQ8IUE1 241 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 OR2Z1Q8NG97 314 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 NDFIP1Q9BT67 221 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 PROCRQ9UNN8 238 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 LHFPL6Q9Y693 200 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 A0A1B0GTI1 187 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 H0Y980 276 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 SIAH2O43255 324 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 ALKBH6Q3KRA9 238 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 MS4A18H0YCH9 400 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 NDUFB4O95168 129 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 CXorf1O96002 111 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 UNC119Q13432 240 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 MS4A18Q3C1V0 323 aa16.8■□□□□ 0.28
SUDS3-204ENST00000543473 FOXC1Q12948 553 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 OR1C1Q15619 314 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 PLPPR5Q32ZL2 321 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 FAM27BQ5VT28 67 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 OR5A2Q8NGI9 324 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 LCTP09848 1927 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 CDIPTO14735 213 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 M0R1B8 84 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 ST8SIA5O15466 376 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 CLEC3BP05452 202 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 SCTP09683 121 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 SRSF3P84103 164 aaKnown RBP16.79■□□□□ 0.28
SUDS3-204ENST00000543473 HIKESHIQ53FT3 197 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 PMS2CLQ68D20 193 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 BLNKQ8WV28 456 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 MKRN2OSH3BPM6 223 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 KLK10O43240 276 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 GNG10P50151 68 aa16.79■□□□□ 0.28
SUDS3-204ENST00000543473 RAB7AP51149 207 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms