RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TMEM56Q96MV1 263 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 CLCC1Q96S66 551 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 EPYCQ99645 322 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ATF6BQ99941 703 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 GINS4Q9BRT9 223 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 RSPO3Q9BXY4 272 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ARL6Q9H0F7 186 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ABCG5Q9H222 651 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 SYT4Q9H2B2 425 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF665Q9H7R5 613 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 A4GALTQ9NPC4 353 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 AURKAIP1Q9NWT8 199 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 TXNL4BQ9NX01 149 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 TAS2R5Q9NYW4 299 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 TECRQ9NZ01 308 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 RPS6KB2Q9UBS0 482 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 OPN4Q9UHM6 478 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF443Q9Y2A4 671 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 KLHDC2Q9Y2U9 406 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF337Q9Y3M9 751 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM56-RWDD3S4R434 201 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 SPTBN1Q01082 2364 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 DSPPQ9NZW4 1301 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 FREM3P0C091 2139 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 MYO7BQ6PIF6 2116 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 SETXQ7Z333 2677 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ICE1Q9Y2F5 2266 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 PCNX3Q9H6A9 2034 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 GTF3C1Q12789 2109 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TRAV39A0A0B4J263 110 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 A0A0J9YW62 118 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TEX13DA0A0J9YY54 714 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TRDV1A0A1B0GX56 115 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 GAGE12BA1L429 117 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 NKX2-6A6NCS4 301 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 GAGE12HA6NDE8 117 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF732B4DXR9 585 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 C19orf84I3L1E1 186 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 BHLHE40O14503 412 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CDIPTO14735 213 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TNFSF11O14788 317 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 WDR1O75083 606 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TOXO94900 526 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CDRT1O95170 752 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 NTN1O95631 604 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 TSPAN15O95858 294 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 EPPINO95925 133 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ACTL6AO96019 429 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CD8AP01732 235 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 GZMBP10144 247 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF17P17021 662 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 GPX2P18283 190 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 KLK2P20151 261 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 PPIBP23284 216 aaKnown RBP3.85□□□□□ -1.79
SF3B1-202ENST00000409915 AGTR1P30556 359 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CEACAM8P31997 349 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-202ENST00000409915 BRS3P32247 399 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 INPP1P49441 399 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 GZMMP51124 257 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CAV2P51636 162 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 FGF8P55075 233 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CTBP2P56545 445 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CLDN12P56749 244 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 CX3CL1P78423 397 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 FABP5Q01469 135 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 FOXF2Q12947 444 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR2F1Q13607 317 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 RHEBQ15382 184 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 EFNB3Q15768 340 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 VAMP3Q15836 100 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 BEAN1Q3B7T3 259 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 KHDC3LQ587J8 217 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 C1orf194Q5T5A4 169 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 REEP3Q6NUK4 255 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ENPP6Q6UWR7 440 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 HEPN1Q6WQI6 88 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 HIST2H3AQ71DI3 136 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 Q75L30 129 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 SLC35D2Q76EJ3 337 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR2W3Q7Z3T1 314 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ABHD12BQ7Z5M8 362 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-202ENST00000409915 GGNQ86UU5 652 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 HS3ST5Q8IZT8 346 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 KLHDC1Q8N7A1 406 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 LRTM2Q8N967 370 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 POC1AQ8NBT0 407 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR4K5Q8NGD3 323 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR4A4PQ8NGN8 299 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR9Q1Q8NGQ5 310 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR8U1Q8NH10 309 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF563Q8TA94 476 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 FNDC9Q8TBE3 224 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 BPIFA2Q96DR5 249 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 UHRF2Q96PU4 802 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 OR5B2Q96R09 309 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 RNF2Q99496 336 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 NIPSNAP1Q9BPW8 284 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 WFDC6Q9BQY6 131 aa3.85□□□□□ -1.79
SF3B1-202ENST00000409915 SUCNR1Q9BXA5 334 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms