RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 LINC00574Q9H8X3 128 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 Q9N2K0 584 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 SLC23A1Q9UHI7 598 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 HSPA12AO43301 675 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 TCF21O43680 179 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 VENTXO95231 258 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 FBP1P09467 338 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 BAMBIQ13145 260 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 MIDNQ504T8 468 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 C9orf139Q6ZV77 190 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 SNX29P2Q8IUI4 249 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 LAX1Q8IWV1 398 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 OR4P4Q8NGL7 312 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 OR9G1Q8NH87 305 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 IGKV1D-8A0A087WSZ0 117 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 SMIM31A0A1B0GVY4 71 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 ODF3BA8MYP8 253 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 J3QR06 171 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 F2RL2O00254 374 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 BET1O15155 118 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 XRCC3O43542 346 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 IGHV4-59P01825 116 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 APOA1P02647 267 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 GSTP1P09211 210 aaKnown RBP9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 HTR1DP28221 377 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 ZNF134P52741 427 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 ARL6IP1Q15041 203 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 C16orf87Q6PH81 154 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 TRAT1Q6PIZ9 186 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 GVQW1Q8N7I0 195 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 OR10X1Q8NGY0 326 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 AJUBAQ96IF1 538 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 AUNIPQ9H7T9 357 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 GFOD1Q9NXC2 390 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 OR1A1Q9P1Q5 309 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 SLC31A2O15432 143 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 SSX5O60225 188 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 IGLV1-47P01700 117 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 GSTT2P0CG29 244 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 GSTT2BP0CG30 244 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 PRRX1P54821 245 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 TAS2R20P59543 309 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 DIAPH2-AS1Q14236 149 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 HMGN3Q15651 99 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 ZNF880Q6PDB4 577 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 ZNF596Q8TC21 504 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 TAF15Q92804 592 aaKnown RBP eCLIP9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 SLIRPQ9GZT3 109 aaKnown RBP9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 PARP12Q9H0J9 701 aaKnown RBP9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 RABL2BQ9UNT1 228 aa9.5□□□□□ -0.89
DEPDC4-202ENST00000378244 A0A087X0M5 115 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 A0A1B0GX30 115 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 MELTFP08582 738 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 CD24P25063 80 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 REG1BP48304 166 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 HILS1P60008 231 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 HLA-DRB3P79483 266 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 HLA-DRB5Q30154 266 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 RNASE12Q5GAN4 147 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 FOXB2Q5VYV0 432 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 MOB1BQ7L9L4 216 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 MMP28Q9H239 520 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 MIXL1Q9H2W2 232 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 EXTL2Q9UBQ6 330 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 TRBV6-6A0A0A6YYG2 114 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 A0A0A6YYH2 397 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 IGKV1-6A0A0C4DH72 117 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 A6NJ64 397 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 TRDCB7Z8K6 153 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 BUB1B-PAK6H3BSN5 160 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 FABP7O15540 132 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 CEACAM6P40199 344 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 HERPUD1Q15011 391 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 MORN2Q502X0 79 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 CFAP161Q6P656 301 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 Q6YL49 198 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 ZNF554Q86TJ5 538 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 OR10A7Q8NGE5 316 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 OR52M1Q8NGK5 317 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 MCFD2Q8NI22 146 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 RBMXL1Q96E39 390 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 SSX3Q99909 188 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 RAB9BQ9NP90 201 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 CCDC59Q9P031 241 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 DPM3Q9P2X0 92 aa9.49□□□□□ -0.89
DEPDC4-202ENST00000378244 J3QRK9 145 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 HLA-DQB1P01920 261 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 CD34P28906 385 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 PITPNAQ00169 270 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 SLC9A3R2Q15599 337 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 LY6EQ16553 131 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 CT45A1Q5HYN5 189 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 ZDHHC22Q8N966 263 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 CT45A3Q8NHU0 189 aa9.48□□□□□ -0.89
DEPDC4-202ENST00000378244 MALSU1Q96EH3 234 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms