RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RCC2Q9P258 522 aaKnown RBP14.99□□□□□ -0.01
SHANK1-201ENST00000293441 V9GYH0 126 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 IGSF23A1L1A6 192 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 ERGP11308 486 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 B2MP61769 119 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 SHISA5Q8N114 240 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 CLRN3Q8NCR9 226 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 A0A1B0GU03 582 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 RANP62826 216 aaKnown RBP14.99□□□□□ -0.01
SHANK1-201ENST00000293441 KLK13Q9UKR3 277 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 RBBP6Q7Z6E9 1792 aaKnown RBP14.99□□□□□ -0.01
SHANK1-201ENST00000293441 A0A0U1RQV5 110 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 MIXL1Q9H2W2 232 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 METTL1Q9UBP6 276 aaKnown RBP14.99□□□□□ -0.01
SHANK1-201ENST00000293441 CRHP06850 196 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 PRSS1P07477 247 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 ZDHHC8Q9ULC8 765 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 HMSDA8MTL9 139 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 FCGR3AP08637 254 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 GZMMP51124 257 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 RP1L1Q8IWN7 2480 aaPredicted RBP14.98□□□□□ -0.01
SHANK1-201ENST00000293441 CCL19Q99731 98 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 GHITMQ9H3K2 345 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 IL17BQ9UHF5 180 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 HIGD1AQ9Y241 93 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 KNTC1P50748 2209 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 SRSF10O75494 262 aaKnown RBP14.98□□□□□ -0.01
SHANK1-201ENST00000293441 RHBDL1O75783 438 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 OR2H2O95918 312 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 FAM210BQ96KR6 192 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 TMSB15BA0A087X1C1 80 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 MFNGO00587 321 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 RGS13O14921 159 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 GREM1O60565 184 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 SOSTQ9BQB4 213 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 DUXBA0A1W2PPF3 345 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 MGST3O14880 152 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 SLC35B1P78383 322 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 PMS2P11Q13670 270 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 TOLLIPQ9H0E2 274 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 LPAR5Q9H1C0 372 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 ATP5J2P56134 94 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 WDR73Q6P4I2 378 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 PHYHIPLQ96FC7 376 aa14.98□□□□□ -0.01
SHANK1-201ENST00000293441 TMEM91Q6ZNR0 172 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 SULT1A1P50225 295 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 FGF12P61328 243 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 PRNTQ86SH4 94 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 ADIPOR1Q96A54 375 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 SRXN1Q9BYN0 137 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 RNF115Q9Y4L5 304 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 TAF1LQ8IZX4 1826 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 WISP3O95389 354 aaPredicted RBP14.97□□□□□ -0.01
SHANK1-201ENST00000293441 HOGA1Q86XE5 327 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 OR10G8Q8NGN5 311 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 IGSF11Q5DX21 431 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 SLC35E4Q6ICL7 350 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 SEC11CQ9BY50 192 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 M0R2Z0 102 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 PAGE4O60829 102 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 RIGQ13278 110 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 SNAI3Q3KNW1 292 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 SLC35E3Q7Z769 313 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 OR1L6Q8NGR2 347 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 SNRNP40Q96DI7 357 aaKnown RBP14.97□□□□□ -0.01
SHANK1-201ENST00000293441 C12orf57Q99622 126 aa14.97□□□□□ -0.01
SHANK1-201ENST00000293441 MRPL37Q9BZE1 423 aaKnown RBP14.97□□□□□ -0.01
SHANK1-201ENST00000293441 ZFC3H1O60293 1989 aaKnown RBP14.96□□□□□ -0.01
SHANK1-201ENST00000293441 LNP1A1A4G5 178 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 HPRT1P00492 218 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 LY6EQ16553 131 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 BSXQ3C1V8 233 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 TMEM255AQ5JRV8 349 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 SNRPCP09234 159 aaKnown RBP14.96□□□□□ -0.01
SHANK1-201ENST00000293441 PRSS53Q2L4Q9 553 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 OR10D4PQ8NGN7 298 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 GUCD1Q96NT3 240 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 CXorf1O96002 111 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 RNF212Q495C1 297 aa14.96□□□□□ -0.01
SHANK1-201ENST00000293441 EIF4E3Q8N5X7 224 aaKnown RBP14.96□□□□□ -0.01
SHANK1-201ENST00000293441 DHRS7CA6NNS2 312 aa14.96□□□□□ -0.02
SHANK1-201ENST00000293441 AP5S1Q9NUS5 200 aa14.96□□□□□ -0.02
SHANK1-201ENST00000293441 HELTA6NFD8 242 aa14.96□□□□□ -0.02
SHANK1-201ENST00000293441 CXCL3P19876 107 aa14.96□□□□□ -0.02
SHANK1-201ENST00000293441 RPL27AP46776 148 aaKnown RBP14.96□□□□□ -0.02
SHANK1-201ENST00000293441 ROM1Q03395 351 aa14.96□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF107Q9UII5 783 aaPredicted RBP14.96□□□□□ -0.02
SHANK1-201ENST00000293441 SMAD7O15105 426 aaKnown RBP14.95□□□□□ -0.02
SHANK1-201ENST00000293441 TIAF1O95411 115 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 KLRB1Q12918 225 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 PCOLCEQ15113 449 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 SLC25A47Q6Q0C1 308 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 IL22RA2Q969J5 263 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 TMEM204Q9BSN7 226 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 KLF9Q13886 244 aaPredicted RBP14.95□□□□□ -0.02
SHANK1-201ENST00000293441 IQCJQ1A5X6 159 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 VWA1Q6PCB0 445 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 GCSAMQ8N6F7 178 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 FDCSPQ8NFU4 85 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 PRDM14Q9GZV8 571 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms