RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RND1Q92730 232 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 SMOC1Q9H4F8 434 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 KIF13BQ9NQT8 1826 aa10.52□□□□□ -0.72
UBR4-205ENST00000417040 VDAC1P21796 283 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 TWIST1Q15672 202 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 GFRALQ6UXV0 394 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 OR4S2Q8NH73 311 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 CES1P1Q9UKY3 287 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 LOC105371267A0A1B0GV96 52 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 IGSF23A1L1A6 192 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 BCL2P10415 239 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 SLC36A1Q7Z2H8 476 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 MOGAT3Q86VF5 341 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 PHF7Q9BWX1 381 aaPredicted RBP10.52□□□□□ -0.73
UBR4-205ENST00000417040 OR51M1Q9H341 326 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 TRAV38-1A0A0B4J264 116 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 hADV38S2A0JD32 116 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 RPL36A-HNRNPH2H7BZ11 118 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 RNPS1Q15287 305 aaKnown RBP10.52□□□□□ -0.73
UBR4-205ENST00000417040 HOGA1Q86XE5 327 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 SFTPA2Q8IWL1 248 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 RAB24Q969Q5 203 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 OR2W1Q9Y3N9 320 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 TRPM3Q9HCF6 1732 aaPredicted RBP10.52□□□□□ -0.73
UBR4-205ENST00000417040 DNASE2O00115 360 aaPredicted RBP10.52□□□□□ -0.73
UBR4-205ENST00000417040 LDLRAD4O15165 306 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 HOXA6P31267 233 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 PPP1CCP36873 323 aaKnown RBP10.52□□□□□ -0.73
UBR4-205ENST00000417040 RIGQ13278 110 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 ACER2Q5QJU3 275 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
UBR4-205ENST00000417040 ZNF519Q8TB69 540 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 PTPMT1Q8WUK0 201 aaPredicted RBP10.52□□□□□ -0.73
UBR4-205ENST00000417040 AMELYQ99218 206 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 GGACTQ9BVM4 153 aa10.52□□□□□ -0.73
UBR4-205ENST00000417040 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 CD81P60033 236 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 HYAL1Q12794 435 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 KHDC3LQ587J8 217 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 DNLZQ5SXM8 178 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 DDA1Q9BW61 102 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 OR2H1Q9GZK4 316 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 DOCK5Q9H7D0 1870 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 IGHV1OR21-1A0A087WYE8 117 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 OR2T8A6NH00 312 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 HIST1H1BP16401 226 aaKnown RBP10.51□□□□□ -0.73
UBR4-205ENST00000417040 PCP4P48539 62 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 ZNF665Q9H7R5 613 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 F11RQ9Y624 299 aaKnown RBP10.51□□□□□ -0.73
UBR4-205ENST00000417040 MIA3Q5JRA6 1907 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 A0A1W2PPC1 479 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 PTP4A3O75365 173 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 FCGR3AP08637 254 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 GPBAR1Q8TDU6 330 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 FAM90A27PA6NNH2 459 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 TNFRSF1AP19438 455 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 MAGEA5P43359 124 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 CTXND1A0A1B0GTU2 59 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 PLAUP00749 431 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 CD74P04233 296 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 CLDN18P56856 261 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 KLF3P57682 345 aaPredicted RBP10.51□□□□□ -0.73
UBR4-205ENST00000417040 CXorf66Q5JRM2 361 aaPredicted RBP10.51□□□□□ -0.73
UBR4-205ENST00000417040 ST6GALNAC3Q8NDV1 305 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 FAM222BQ8WU58 562 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
UBR4-205ENST00000417040 GAGE10A6NGK3 116 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 ADAM11O75078 769 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 SRFP11831 508 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 KIAA1644Q3SXP7 199 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 MYOZ3Q8TDC0 251 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 GABRG3Q99928 467 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 PRSS27Q9BQR3 290 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 ISLRO14498 428 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 DNPH1O43598 174 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 RELBQ01201 579 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 WFDC3Q8IUB2 231 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 ZNF738Q8NE65 137 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 PGLYRP3Q96LB9 341 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 MRPL18Q9H0U6 180 aaKnown RBP10.5□□□□□ -0.73
UBR4-205ENST00000417040 A0A1B0GU03 582 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 CXCL10P02778 98 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 HOXD4P09016 255 aaPredicted RBP10.5□□□□□ -0.73
UBR4-205ENST00000417040 SCTP09683 121 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 KRTCAP3Q53RY4 240 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 OR51B2Q9Y5P1 312 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 BTF3P20290 206 aaKnown RBP10.5□□□□□ -0.73
UBR4-205ENST00000417040 BRS3P32247 399 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 RPL30P62888 115 aaKnown RBP10.5□□□□□ -0.73
UBR4-205ENST00000417040 LHX8Q68G74 356 aa10.5□□□□□ -0.73
UBR4-205ENST00000417040 MRPS18AQ9NVS2 196 aaKnown RBP10.5□□□□□ -0.73
UBR4-205ENST00000417040 SRP14P37108 136 aaKnown RBP10.5□□□□□ -0.73
UBR4-205ENST00000417040 ZNFX1Q9P2E3 1918 aaKnown RBP10.49□□□□□ -0.73
UBR4-205ENST00000417040 TRGC1P0CF51 173 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 MFAP2P55001 183 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 COL10A1Q03692 680 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 TEPPQ6URK8 271 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 PGLYRP4Q96LB8 373 aa10.49□□□□□ -0.73
UBR4-205ENST00000417040 SH2D7A6NKC9 451 aaPredicted RBP10.49□□□□□ -0.73
UBR4-205ENST00000417040 PLP1P60201 277 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms