RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 FAM172BPA6NC97 362 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 CA11O75493 328 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 MMP23AO75900 390 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 HLA-DQB1P01920 261 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 FCGR3AP08637 254 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 ZNF728P0DKX0 622 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 OMGP23515 440 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 GDNFP39905 211 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 DLX6P56179 175 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 PAX5Q02548 391 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 KLRD1Q13241 179 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 IL18Q14116 193 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 C17orf58Q2M2W7 97 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 BAIAP2L2Q6UXY1 529 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 GAPTQ8N292 157 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 OR4M2Q8NGB6 313 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 OR1L1Q8NH94 360 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 ARL11Q969Q4 196 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 WDFY2Q96P53 400 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 TMPRSS13Q9BYE2 586 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 C12orf4Q9NQ89 552 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 CALYQ9NYX4 217 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 PTTG2Q9NZH5 202 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 KCNS2Q9ULS6 477 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.61
CD44-224ENST00000526669 MTORP42345 2549 aa11.27□□□□□ -0.61
CD44-224ENST00000526669 IGHV3-43A0A0B4J1X8 118 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 ZNF729A6NN14 1252 aaPredicted RBP11.26□□□□□ -0.61
CD44-224ENST00000526669 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 AVPP01185 164 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 IGHV3-43DP0DP04 118 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 PAX8Q06710 450 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 ARL6IP1Q15041 203 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 C6orf183Q5T699 404 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 METTL11BQ5VVY1 283 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 ZNF880Q6PDB4 577 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 CLEC9AQ6UXN8 241 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 IL17RELQ6ZVW7 336 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 VMO1Q7Z5L0 202 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 PDZD9Q8IXQ8 264 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 GVQW1Q8N7I0 195 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 Q8N7P7 452 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 CORO2AQ92828 525 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 TBX15Q96SF7 602 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 SIRPDQ9H106 197 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 C7orf69Q9H7B7 122 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 Q9N2K0 584 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 AUP1Q9Y679 476 aa11.26□□□□□ -0.61
CD44-224ENST00000526669 IGHV3OR16-10A0A075B7F0 116 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PPH5 198 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 TOX4O94842 621 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 HBZP02008 142 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 MMP9P14780 707 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 NFYBP25208 207 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 PRSS3P35030 304 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 HLA-DRB3P79483 266 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 CR1LQ2VPA4 569 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 FAM53AQ6NSI3 398 aaPredicted RBP11.25□□□□□ -0.61
CD44-224ENST00000526669 ZNF565Q8N9K5 539 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 ABHD1Q96SE0 405 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 ST6GALNAC5Q9BVH7 336 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 SUCNR1Q9BXA5 334 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 GAL3ST2Q9H3Q3 398 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 RIMS4Q9H426 269 aaPredicted RBP11.25□□□□□ -0.61
CD44-224ENST00000526669 NCOR1P1Q9H4R4 102 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 TAF9BQ9HBM6 251 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 MBNL3Q9NUK0 354 aaKnown RBP11.25□□□□□ -0.61
CD44-224ENST00000526669 TAS2R3Q9NYW6 316 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 IDI2-AS1Q9NZ38 188 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 KCNIP1Q9NZI2 227 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 KPTNQ9Y664 436 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 NAV3Q8IVL0 2385 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
CD44-224ENST00000526669 TRBV6-6A0A0A6YYG2 114 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 FABP12A6NFH5 140 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 C17orf98A8MV24 154 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 C15orf65H3BRN8 121 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 M0R1W7 72 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 IGHV3-7P01780 117 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 MELTFP08582 738 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 CGB3P0DN86 165 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 CGB7P0DN87 165 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 FOSL1P15407 271 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 HOXB4P17483 251 aaPredicted RBP11.24□□□□□ -0.61
CD44-224ENST00000526669 COX7A1P24310 79 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 DGCR2P98153 550 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 HMGN3Q15651 99 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 UTF1Q5T230 341 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
CD44-224ENST00000526669 MOB1BQ7L9L4 216 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 CCDC190Q86UF4 302 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 C11orf42Q8N5U0 333 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms