RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LPCAT3Q6P1A2 487 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 NOXA1Q86UR1 476 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 OR2AK2Q8NG84 335 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 OR52B4Q8NGK2 314 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 CAPSLQ8WWF8 208 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 DMRTB1Q96MA1 342 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 PHB2Q99623 299 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 RANBP3Q9H6Z4 567 aaPredicted RBP11.61□□□□□ -0.55
TPM1-215ENST00000558868 PCDHB10Q9UN67 800 aa11.61□□□□□ -0.55
TPM1-215ENST00000558868 SPTAN1Q13813 2472 aaKnown RBP11.6□□□□□ -0.55
TPM1-215ENST00000558868 FAM172BPA6NC97 362 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 LRRC30A6NM36 301 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 B9A039 149 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 E7EQL1 145 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 CLDN14O95500 239 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 DUS4LO95620 317 aaKnown RBP11.6□□□□□ -0.55
TPM1-215ENST00000558868 LHBP01229 141 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 ZNF728P0DKX0 622 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 CD34P28906 385 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 ERP29P30040 261 aaKnown RBP11.6□□□□□ -0.55
TPM1-215ENST00000558868 FCGR2CP31995 323 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 PRDX2P32119 198 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 RAP2BP61225 183 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 HLA-DRB3P79483 266 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 TLE1Q04724 770 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 PPP1R1AQ13522 171 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 LIN54Q6MZP7 749 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 DMRTC2Q8IXT2 367 aaPredicted RBP11.6□□□□□ -0.55
TPM1-215ENST00000558868 LILRB1Q8NHL6 650 aaPredicted RBP11.6□□□□□ -0.55
TPM1-215ENST00000558868 MS4A5Q9H3V2 200 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 C5orf66Q9H5L9 145 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 KCNIP1Q9NZI2 227 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 SLC23A1Q9UHI7 598 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 FBXO9Q9UK97 447 aaPredicted RBP11.6□□□□□ -0.55
TPM1-215ENST00000558868 TRAPPC2LQ9UL33 140 aa11.6□□□□□ -0.55
TPM1-215ENST00000558868 A0A0B4J2A0 478 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 RFPL4AA6NLU0 287 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 RFPL4AL1F8VTS6 287 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 SNAPC5O75971 98 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 SFT2D2O95562 160 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 CXCL3P19876 107 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 GNLYP22749 145 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 VAMP1P23763 118 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 PAX5Q02548 391 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 COL10A1Q03692 680 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 ABCA11PQ4W5N1 156 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 TRAT1Q6PIZ9 186 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 Q6ZPA2 131 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 C17orf107Q6ZR85 190 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 SLC38A6Q8IZM9 456 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 ZNF843Q8N446 348 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 GCSAMQ8N6F7 178 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 UXS1Q8NBZ7 420 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 ADAD2Q8NCV1 583 aaKnown RBP11.59□□□□□ -0.55
TPM1-215ENST00000558868 COQ8AQ8NI60 647 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 PLPPR1Q8TBJ4 325 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 MITD1Q8WV92 249 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 MOB3AQ96BX8 217 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 PIK3IP1Q96FE7 263 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 ZNF486Q96H40 463 aaPredicted RBP11.59□□□□□ -0.55
TPM1-215ENST00000558868 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 RTBDNQ9BSG5 229 aaPredicted RBP11.59□□□□□ -0.55
TPM1-215ENST00000558868 GCM1Q9NP62 436 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 DYNLRB1Q9NP97 96 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 SHPKQ9UHJ6 478 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
TPM1-215ENST00000558868 NPIPB11E5RHQ5 1161 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 SLC22A5O76082 557 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 OR2A4O95047 310 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 PPYP01298 95 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 SCTP09683 121 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 PSG2P11465 335 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 EGR1P18146 543 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 GZMKP49863 264 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 TFF3Q07654 80 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 ATXN7L3Q14CW9 347 aaPredicted RBP11.58□□□□□ -0.56
TPM1-215ENST00000558868 C6orf183Q5T699 404 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 NLRC3Q7RTR2 1065 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 SGPP2Q8IWX5 399 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 FAM185AQ8N0U4 392 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 C1orf87Q8N0U7 546 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 BOLLQ8N9W6 283 aaKnown RBP11.58□□□□□ -0.56
TPM1-215ENST00000558868 CCDC71LQ8N9Z2 235 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 OR5T2Q8NGG2 359 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 OR10J5Q8NHC4 309 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 FAM222BQ8WU58 562 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 SNX22Q96L94 193 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 OR2A7Q96R45 310 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 CABLES2Q9BTV7 478 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 DLL4Q9NR61 685 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 MBNL3Q9NUK0 354 aaKnown RBP11.58□□□□□ -0.56
TPM1-215ENST00000558868 PCNX1Q96RV3 2341 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 CADP27708 2225 aa11.58□□□□□ -0.56
TPM1-215ENST00000558868 SPENQ96T58 3664 aaKnown RBP11.57□□□□□ -0.56
TPM1-215ENST00000558868 OOEPA6NGQ2 149 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 C3orf80F5H4A9 247 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 GOSR2O14653 212 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 BET1O15155 118 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 PSPNO60542 156 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 MUC1P15941 1255 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms