RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 KIRREL1Q96J84 757 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 SCNM1Q9BWG6 230 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 SUCNR1Q9BXA5 334 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 CCL28Q9NRJ3 127 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 UFSP2Q9NUQ7 469 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 SDHAF2Q9NX18 166 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 OR14J1Q9UGF5 321 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 C3orf85A0A1B0GTC6 90 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 hCG_1807616A0A1W2PRN6 198 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 PROB1E7EW31 1015 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 TFF1P04155 84 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 MSMPQ1L6U9 139 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 ZNF880Q6PDB4 577 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 TBC1D26Q86UD7 250 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 BCL2L14Q9BZR8 327 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 SLC5A7Q9GZV3 580 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 TUBD1Q9UJT1 453 aa12.24□□□□□ -0.45
NUMB-216ENST00000555394 LSM5Q9Y4Y9 91 aaKnown RBP12.24□□□□□ -0.45
NUMB-216ENST00000555394 ANKRD11Q6UB99 2663 aaPredicted RBP12.23□□□□□ -0.45
NUMB-216ENST00000555394 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 ZNF146Q15072 292 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 Q8IYB0 196 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 LRTM2Q8N967 370 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 ZNF565Q8N9K5 539 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 CCDC71LQ8N9Z2 235 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 TP53TG5Q9Y2B4 290 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 RP1L1Q8IWN7 2480 aaPredicted RBP12.23□□□□□ -0.45
NUMB-216ENST00000555394 A6NLC8 198 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 GLAP06280 429 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 NAAAQ02083 359 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 ZNF718Q3SXZ3 478 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 LGI3Q8N145 548 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 GALNT11Q8NCW6 608 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 OR52M1Q8NGK5 317 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 RBPMSQ93062 196 aaKnown RBP12.23□□□□□ -0.45
NUMB-216ENST00000555394 AQP10Q96PS8 301 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 RHOFQ9HBH0 211 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 OR1A1Q9P1Q5 309 aa12.23□□□□□ -0.45
NUMB-216ENST00000555394 MFSD2BA6NFX1 497 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 TMEM210A6NLX4 147 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 TNFSF12O43508 249 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 CTXN2P0C2S0 81 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 KITLGP21583 273 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 GCH1P30793 250 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 HLA-DRB3P79483 266 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 THOC7Q6I9Y2 204 aaKnown RBP12.22□□□□□ -0.45
NUMB-216ENST00000555394 LRP11Q86VZ4 500 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 SLC35G3Q8N808 338 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 H7C1Q1 480 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 PSPNO60542 156 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 MBPP02686 304 aaPredicted RBP12.22□□□□□ -0.45
NUMB-216ENST00000555394 PET100P0DJ07 73 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 HKR1P10072 659 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 NUP62P37198 522 aaPredicted RBP12.22□□□□□ -0.45
NUMB-216ENST00000555394 TMEM268Q5VZI3 342 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 FAM180AQ6UWF9 173 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 C22orf34Q6ZV56 151 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 SPACA3Q8IXA5 215 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
NUMB-216ENST00000555394 CXXC4Q9H2H0 198 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 AMDHD2Q9Y303 409 aa12.22□□□□□ -0.45
NUMB-216ENST00000555394 M0R1B8 84 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 GPR31O00270 319 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 SH2D1BO14796 132 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 DEDDO75618 318 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 TIMP3P35625 211 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 SNTB1Q13884 538 aaKnown RBP12.21□□□□□ -0.45
NUMB-216ENST00000555394 ZNF324BQ6AW86 544 aaPredicted RBP12.21□□□□□ -0.45
NUMB-216ENST00000555394 ZNF497Q6ZNH5 498 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 CISD2Q8N5K1 135 aaKnown RBP12.21□□□□□ -0.45
NUMB-216ENST00000555394 OR4A4PQ8NGN8 299 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 OR10J5Q8NHC4 309 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 SLC25A32Q9H2D1 315 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 DUSP13Q9UII6 198 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 ERRFI1Q9UJM3 462 aaPredicted RBP12.21□□□□□ -0.45
NUMB-216ENST00000555394 TRAPPC2LQ9UL33 140 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 ACACAQ13085 2346 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.21□□□□□ -0.45
NUMB-216ENST00000555394 HAND1O96004 215 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 FAM27E3Q08E93 113 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 KRTCAP3Q53RY4 240 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 MBNL2Q5VZF2 373 aaKnown RBP12.21□□□□□ -0.45
NUMB-216ENST00000555394 FAM57AQ8TBR7 257 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 HES4Q9HCC6 221 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 OR2S2Q9NQN1 319 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.45
NUMB-216ENST00000555394 UBE2J1Q9Y385 318 aaPredicted RBP12.21□□□□□ -0.45
NUMB-216ENST00000555394 WDR82Q6UXN9 313 aa12.21□□□□□ -0.46
NUMB-216ENST00000555394 SHARPINQ9H0F6 387 aa12.21□□□□□ -0.46
NUMB-216ENST00000555394 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.46
NUMB-216ENST00000555394 DNAJB11Q9UBS4 358 aa12.21□□□□□ -0.46
NUMB-216ENST00000555394 LGALS8O00214 317 aa12.2□□□□□ -0.46
NUMB-216ENST00000555394 BMP5P22003 454 aa12.2□□□□□ -0.46
NUMB-216ENST00000555394 TIMM23BQ5SRD1 257 aa12.2□□□□□ -0.46
NUMB-216ENST00000555394 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
NUMB-216ENST00000555394 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
NUMB-216ENST00000555394 PHYHIPLQ96FC7 376 aa12.2□□□□□ -0.46
NUMB-216ENST00000555394 MED9Q9NWA0 146 aa12.2□□□□□ -0.46
NUMB-216ENST00000555394 PFDN2Q9UHV9 154 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms