RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 OR2C3Q8N628 320 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
GPC1-209ENST00000495100 OR1A1Q9P1Q5 309 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 OR6C65A6NJZ3 312 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 FIGNL2A6NMB9 653 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 H0YL77 283 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 OPN1MWP04001 364 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 PTAFRP25105 342 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 IL2RGP31785 369 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 FUT6P51993 359 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 EIF2S3LQ2VIR3 472 aaKnown RBP11.6□□□□□ -0.55
GPC1-209ENST00000495100 ZNF818PQ6ZRF7 136 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 LHFPL2Q6ZUX7 228 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 NUFIP2Q7Z417 695 aaKnown RBP11.6□□□□□ -0.55
GPC1-209ENST00000495100 NTNG2Q96CW9 530 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 SMCO4Q9NRQ5 59 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 OTOGLQ3ZCN5 2332 aa11.6□□□□□ -0.55
GPC1-209ENST00000495100 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.6□□□□□ -0.55
GPC1-209ENST00000495100 TNCP24821 2201 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 SPTBN4Q9H254 2564 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 OR6C6A6NF89 314 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 MPPED1O15442 326 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 OR2C1O95371 312 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 PSG2P11465 335 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 ATP6V0CP27449 155 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 HFEQ30201 348 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 WFDC1Q9HC57 220 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 RCC2Q9P258 522 aaKnown RBP11.59□□□□□ -0.55
GPC1-209ENST00000495100 YIF1AO95070 293 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 CELA3BP08861 270 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 MPLP40238 635 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 STARD6P59095 220 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 ARL6IP1Q15041 203 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 PPP1R32Q7Z5V6 425 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 PTX4Q96A99 478 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 NABP1Q96AH0 204 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 IMMP1LQ96LU5 166 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 PRELID3BQ9Y3B1 194 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 CTSDP07339 412 aaPredicted RBP11.59□□□□□ -0.55
GPC1-209ENST00000495100 CTRB1P17538 263 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 SRD5A2P31213 254 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 EDDM3BP56851 147 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 CTRB2Q6GPI1 263 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 SPSB1Q96BD6 273 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 S100PBPQ96BU1 408 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 TRIB1Q96RU8 372 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 PBDC1Q9BVG4 233 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 ANGPTL4Q9BY76 406 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 OR2J1Q9GZK6 312 aa11.59□□□□□ -0.55
GPC1-209ENST00000495100 RALYQ9UKM9 306 aaKnown RBP11.59□□□□□ -0.55
GPC1-209ENST00000495100 TRAV20A0A0B4J274 112 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 LY6G6EA0A0G2JKS1 128 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 TTLL8A6PVC2 850 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 IFI6P09912 130 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 PRF1P14222 555 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 EWSR1Q01844 656 aaKnown RBP eCLIP11.58□□□□□ -0.56
GPC1-209ENST00000495100 SRSF6Q13247 344 aaKnown RBP11.58□□□□□ -0.56
GPC1-209ENST00000495100 C1orf210Q8IVY1 113 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 NINJ1Q92982 152 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 U3KQA8 63 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 A0A1W2PPE3 182 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 ZNF98A6NK75 572 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 KIAA1324LA8MWY0 1029 aaPredicted RBP11.58□□□□□ -0.56
GPC1-209ENST00000495100 ADGRG4Q8IZF6 3080 aa11.58□□□□□ -0.56
GPC1-209ENST00000495100 IGLV3-12A0A075B6K2 115 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 DEDDO75618 318 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 SCAF4O95104 1147 aaKnown RBP11.57□□□□□ -0.56
GPC1-209ENST00000495100 CD63P08962 238 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 CHATP28329 748 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 UBE2G2P60604 165 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 SPEM2Q0P670 501 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 WBP1Q96G27 269 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 UBE2L5PA0A1B0GUS4 154 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 RBM11P57052 281 aaKnown RBP11.57□□□□□ -0.56
GPC1-209ENST00000495100 FLI1Q01543 452 aaPredicted RBP11.57□□□□□ -0.56
GPC1-209ENST00000495100 ADIRFQ15847 76 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 FAHD2BQ6P2I3 314 aaPredicted RBP11.57□□□□□ -0.56
GPC1-209ENST00000495100 PHYHIPLQ96FC7 376 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 FAHD2AQ96GK7 314 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 HSF4Q9ULV5 492 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 ANKRD11Q6UB99 2663 aaPredicted RBP11.57□□□□□ -0.56
GPC1-209ENST00000495100 TMEM127O75204 238 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 S100A2P29034 98 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 CEACAM6P40199 344 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 MECP2P51608 486 aaKnown RBP11.57□□□□□ -0.56
GPC1-209ENST00000495100 PLXNB1O43157 2135 aa11.57□□□□□ -0.56
GPC1-209ENST00000495100 CRYM-AS1A6NIL9 109 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 WNT9BO14905 357 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 CYB5BO43169 146 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 SYNGR3O43761 229 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 MEOX1P50221 254 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 ZNF239Q16600 458 aaKnown RBP11.56□□□□□ -0.56
GPC1-209ENST00000495100 WDR5BQ86VZ2 330 aa11.56□□□□□ -0.56
GPC1-209ENST00000495100 MRGPRDQ8TDS7 321 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms