RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 E9PQ18 207 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 PAGE4O60829 102 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 SIP14410 1827 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 VDAC1P21796 283 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 FABP6P51161 128 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 VAMP3Q15836 100 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 GBF1Q92538 1859 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 PCGF1Q9BSM1 259 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 FAM117AQ9C073 453 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 CBLN4Q9NTU7 201 aa13.71□□□□□ -0.22
USP43-201ENST00000285199 GATCO43716 136 aaKnown RBP13.7□□□□□ -0.22
USP43-201ENST00000285199 CELA2AP08217 269 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 SCTP09683 121 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 CTXN2P0C2S0 81 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 CDX1P47902 265 aaPredicted RBP13.7□□□□□ -0.22
USP43-201ENST00000285199 PKIAP61925 76 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 VPS25Q9BRG1 176 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 VAMP8Q9BV40 100 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 CTDSP1Q9GZU7 261 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 A0A1B0GTI1 187 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 FCGR3AP08637 254 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 TEX30Q5JUR7 227 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 LYSMD4Q5XG99 296 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 TGIF2LXQ8IUE1 241 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 OR10G4Q8NGN3 311 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 OR10G9Q8NGN4 311 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 OR10G7Q8NGN6 311 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 RHBDD1Q8TEB9 315 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 APH1AQ96BI3 265 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 LOC285556D6RIA3 1793 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 RNF212BA8MTL3 300 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 HSBP1L1C9JCN9 74 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 SYNGR2O43760 224 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 DTYMKP23919 212 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 CYB561P49447 251 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 ERVFC1-1P60608 527 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 OR8G1Q15617 311 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 ACSM6Q6P461 480 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 BTNL3Q6UXE8 466 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 ANKRD37Q7Z713 158 aa13.7□□□□□ -0.22
USP43-201ENST00000285199 TIMM8AO60220 97 aaPredicted RBP13.69□□□□□ -0.22
USP43-201ENST00000285199 PRDX4Q13162 271 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 GUSBP11Q6P575 273 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 OR6X1Q8NH79 312 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 KCNK17Q96T54 332 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 HIPK2Q9H2X6 1198 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 COLCA2A8K830 154 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 TMEM14DPA8MWL7 114 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 PSG2P11465 335 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 GLB1P16278 677 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 OR5I1Q13606 314 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 NANOS1Q8WY41 292 aaKnown RBP13.69□□□□□ -0.22
USP43-201ENST00000285199 PTX4Q96A99 478 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 RASL10BQ96S79 203 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 RTBDNQ9BSG5 229 aaPredicted RBP13.69□□□□□ -0.22
USP43-201ENST00000285199 METTL1Q9UBP6 276 aaKnown RBP13.69□□□□□ -0.22
USP43-201ENST00000285199 MTCL1Q9Y4B5 1905 aaKnown RBP13.69□□□□□ -0.22
USP43-201ENST00000285199 BTNL8Q6UX41 500 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 ZNF519Q8TB69 540 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 DEFB127Q9H1M4 99 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 STARD10Q9Y365 291 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 PAPPA2Q9BXP8 1791 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 RALGAPA2Q2PPJ7 1873 aa13.69□□□□□ -0.22
USP43-201ENST00000285199 LILRA5A6NI73 299 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 M0R143 59 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 GAPDHP04406 335 aaKnown RBP13.68□□□□□ -0.22
USP43-201ENST00000285199 CCL20P78556 96 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 PAQR4Q8N4S7 273 aaPredicted RBP13.68□□□□□ -0.22
USP43-201ENST00000285199 ZNF586Q9NXT0 402 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 FKBP11Q9NYL4 201 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 MYO7BQ6PIF6 2116 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 DANCRP0C864 163 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 SNAI3Q3KNW1 292 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 ALKBH6Q3KRA9 238 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 VN1R17PQ8TDU5 208 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 KIAA1456Q9P272 454 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 NAT8BQ9UHF3 227 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 FZR1Q9UM11 496 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 FCN1O00602 326 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 HYAL1Q12794 435 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 SPNS3Q6ZMD2 512 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 C16orf82Q7Z2V1 217 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 OR5D13Q8NGL4 314 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 CHST5Q9GZS9 411 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 BOKQ9UMX3 212 aaPredicted RBP13.68□□□□□ -0.22
USP43-201ENST00000285199 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 C9JQL5 133 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 BCL3P20749 454 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 RPS23P62266 143 aaKnown RBP13.68□□□□□ -0.22
USP43-201ENST00000285199 SUMO1P63165 101 aaKnown RBP13.68□□□□□ -0.22
USP43-201ENST00000285199 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
USP43-201ENST00000285199 NPIPB9F8W1W9 429 aa13.67□□□□□ -0.22
USP43-201ENST00000285199 PIAS2O75928 621 aa13.67□□□□□ -0.22
USP43-201ENST00000285199 KHDC3LQ587J8 217 aa13.67□□□□□ -0.22
USP43-201ENST00000285199 OR10AD1Q8NGE0 317 aa13.67□□□□□ -0.22
USP43-201ENST00000285199 TMEM230Q96A57 120 aa13.67□□□□□ -0.22
USP43-201ENST00000285199 GABRG3Q99928 467 aa13.67□□□□□ -0.22
USP43-201ENST00000285199 TSC2P49815 1807 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms