RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CACNA1IQ9P0X4 2223 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 ADAM10O14672 748 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 UBE2G2P60604 165 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 CLEC9AQ6UXN8 241 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 PPP1R32Q7Z5V6 425 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 C1orf174Q8IYL3 243 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 TMEM147Q9BVK8 224 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FKBP11Q9NYL4 201 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 NPBWR1P48145 328 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 HFEQ30201 348 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 NEIL1Q96FI4 390 aaPredicted RBP14.53□□□□□ -0.08
PHRF1-201ENST00000264555 PRDM6Q9NQX0 595 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A10PA6NDY2 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A18PA6NE21 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A16PA6NEW6 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A20PA6NIJ5 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A8PA6NJQ4 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A7PA6NKC0 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A22PA8MWA6 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A12PA8MX19 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A5PA8MXJ8 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A23PA8MXZ1 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A15PP0C7V4 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A13PP0C7W8 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A14PP0C7W9 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 FAM90A24PP0C7X0 464 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 RAB4AP20338 218 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 ETV3LQ6ZN32 361 aa14.53□□□□□ -0.08
PHRF1-201ENST00000264555 IGLV3-12A0A075B6K2 115 aa14.52□□□□□ -0.08
PHRF1-201ENST00000264555 COX7A2P2O60397 106 aa14.52□□□□□ -0.08
PHRF1-201ENST00000264555 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.08
PHRF1-201ENST00000264555 C19orf57Q0VDD7 668 aa14.52□□□□□ -0.08
PHRF1-201ENST00000264555 A0A1B0GU03 582 aa14.52□□□□□ -0.08
PHRF1-201ENST00000264555 ZNF250P15622 560 aa14.52□□□□□ -0.08
PHRF1-201ENST00000264555 STPG1Q5TH74 334 aa14.52□□□□□ -0.08
PHRF1-201ENST00000264555 OR4S2Q8NH73 311 aa14.52□□□□□ -0.08
PHRF1-201ENST00000264555 BTNL3Q6UXE8 466 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 ZNF71Q9NQZ8 489 aaPredicted RBP14.52□□□□□ -0.09
PHRF1-201ENST00000264555 HSF4Q9ULV5 492 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 TMEM14DPA8MWL7 114 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 RPS11P62280 158 aaKnown RBP eCLIP14.52□□□□□ -0.09
PHRF1-201ENST00000264555 EWSR1Q01844 656 aaKnown RBP eCLIP14.52□□□□□ -0.093e-6■■□□□ 12.3
PHRF1-201ENST00000264555 ZNF362Q5T0B9 420 aaPredicted RBP14.52□□□□□ -0.09
PHRF1-201ENST00000264555 ACY3Q96HD9 319 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 TRIOBPQ9H2D6 2365 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 FTH1P19P0C7X4 201 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 ACP1P24666 158 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 CD200P41217 278 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 DEFA6Q01524 100 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 MOB3BQ86TA1 216 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 MOGAT3Q86VF5 341 aa14.52□□□□□ -0.09
PHRF1-201ENST00000264555 TRAV38-1A0A0B4J264 116 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 CD74P04233 296 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 TMEM50BP56557 158 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 NAAAQ02083 359 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 SMIM15Q7Z3B0 74 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 S100A8P05109 93 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 ADRA2AP08913 450 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 ZNF488Q96MN9 340 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 PRDM14Q9GZV8 571 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 RNF7Q9UBF6 113 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 MED19A0JLT2 244 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-201ENST00000264555 NFAM1Q8NET5 270 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-201ENST00000264555 R3HDM4Q96D70 268 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 COX5BP10606 129 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 UCP2P55851 309 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 EFNB1P98172 346 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 CDCP2Q5VXM1 449 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 NIT2Q9NQR4 276 aa14.51□□□□□ -0.09
PHRF1-201ENST00000264555 LOC390937A0A1W2PQ73 354 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 HNF1AP20823 631 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 CSN1S1P47710 185 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 MRPS11P82912 194 aaKnown RBP14.5□□□□□ -0.09
PHRF1-201ENST00000264555 HABP2Q14520 560 aaPredicted RBP14.5□□□□□ -0.09
PHRF1-201ENST00000264555 DBX2Q6ZNG2 339 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 ZNF251Q9BRH9 671 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 SCN2AQ99250 2005 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 RBFOX3A6NFN3 312 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 UBE2V2Q15819 145 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 ZNF883P0CG24 379 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 SULT1A1P50225 295 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 IFITM2Q01629 132 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 ZNF528Q3MIS6 628 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 FNDC7Q5VTL7 733 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 J3QRE1 110 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 SEC11BP0C7V7 166 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 ZNF154Q13106 437 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 LRFN3Q9BTN0 628 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 MSL2Q9HCI7 577 aa14.5□□□□□ -0.09
PHRF1-201ENST00000264555 TRAV39A0A0B4J263 110 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 P2RY6Q15077 328 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 OR10G4Q8NGN3 311 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 OR10G9Q8NGN4 311 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 OR10G7Q8NGN6 311 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 MRGPRFQ96AM1 343 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 WNT5BQ9H1J7 359 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 A0A1W2PPQ1 181 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 NKX2-8O15522 239 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 ZNF737O75373 536 aa14.49□□□□□ -0.09
PHRF1-201ENST00000264555 SLC25A53Q5H9E4 307 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms