RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
CNOT3-210ENST00000618939 H1FXQ92522 213 aaKnown RBP12.1□□□□□ -0.47
CNOT3-210ENST00000618939 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
CNOT3-210ENST00000618939 CEP250Q9BV73 2442 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 MEX3AA1L020 520 aaKnown RBP12.09□□□□□ -0.47
CNOT3-210ENST00000618939 M0R1B8 84 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 ABCD4O14678 606 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 MELTFP08582 738 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 COX6A1P12074 109 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 S1PR3Q99500 378 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 NRIP2Q9BQI9 281 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 TIMM8BQ9Y5J9 83 aaPredicted RBP12.09□□□□□ -0.47
CNOT3-210ENST00000618939 NOTCH4Q99466 2003 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 LRRC30A6NM36 301 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 FGF2P09038 288 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 GABRA4P48169 554 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 SLC38A11Q08AI6 406 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 GUCA2BQ16661 112 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 OR10AD1Q8NGE0 317 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 POC1BQ8TC44 478 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 NPAS1Q99742 590 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 SOX7Q9BT81 388 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 C21orf140B9A014 251 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 TGOLN2O43493 480 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 F12P00748 615 aaPredicted RBP12.09□□□□□ -0.47
CNOT3-210ENST00000618939 OR3A1P47881 315 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 RNF212Q495C1 297 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 OR2A2Q6IF42 318 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 C15orf54Q8N8G6 183 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 PILRBQ9UKJ0 227 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 J3QT63 122 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 GAPDHP04406 335 aaKnown RBP12.09□□□□□ -0.47
CNOT3-210ENST00000618939 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
CNOT3-210ENST00000618939 C4orf17Q53FE4 359 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 DCAF10Q5QP82 559 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 HES3Q5TGS1 186 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 AQP10Q96PS8 301 aa12.09□□□□□ -0.47
CNOT3-210ENST00000618939 AKIRIN1Q9H9L7 192 aaPredicted RBP12.09□□□□□ -0.47
CNOT3-210ENST00000618939 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 SULT1A2P50226 295 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 C10orf128Q5T292 105 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.48
CNOT3-210ENST00000618939 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.08□□□□□ -0.48
CNOT3-210ENST00000618939 SYNGR2O43760 224 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 ACTL6AO96019 429 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 PLAC9Q5JTB6 97 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 NFAM1Q8NET5 270 aaPredicted RBP12.08□□□□□ -0.48
CNOT3-210ENST00000618939 ADAMTS17Q8TE56 1095 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 ISOC2Q96AB3 205 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 Q96M66 194 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 C7orf77A4D0Y5 90 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 DHRS7CA6NNS2 312 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 MUC1P15941 1255 aaPredicted RBP12.08□□□□□ -0.48
CNOT3-210ENST00000618939 HIKESHIQ53FT3 197 aa12.08□□□□□ -0.48
CNOT3-210ENST00000618939 CISD2Q8N5K1 135 aaKnown RBP12.08□□□□□ -0.48
CNOT3-210ENST00000618939 PATZ1Q9HBE1 687 aaKnown RBP12.08□□□□□ -0.48
CNOT3-210ENST00000618939 CHCHD2Q9Y6H1 151 aaPredicted RBP12.08□□□□□ -0.48
CNOT3-210ENST00000618939 A0A1B0GTI1 187 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 MAP1LC3B2A6NCE7 125 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 DEDDO75618 318 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 PDGFBP01127 241 aaPredicted RBP12.07□□□□□ -0.48
CNOT3-210ENST00000618939 DAOP14920 347 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 ZNF154Q13106 437 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 RIPPLY2Q5TAB7 128 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 KLHDC3Q9BQ90 382 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 MAP1LC3BQ9GZQ8 125 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 OR2D2Q9H210 308 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 DECR2Q9NUI1 292 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 LIPGQ9Y5X9 500 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 GOLGB1Q14789 3259 aaKnown RBP12.07□□□□□ -0.48
CNOT3-210ENST00000618939 FAM74A7A6NL05 159 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 SHISA7A6NL88 538 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 CDIPTO14735 213 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 ENSAO43768 121 aaKnown RBP12.07□□□□□ -0.48
CNOT3-210ENST00000618939 APOA2P02652 100 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 RBPJQ06330 500 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 CLEC12BQ2HXU8 276 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 FAM74A3Q4VXF1 159 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 OR2Z1Q8NG97 314 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 OR13D1Q8NGV5 346 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 FBXO17Q96EF6 278 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 SRXN1Q9BYN0 137 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 HSF4Q9ULV5 492 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 M0R1X1 148 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 ARG1P05089 322 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 NOVA1P51513 510 aaKnown RBP12.07□□□□□ -0.48
CNOT3-210ENST00000618939 NHLH2Q02577 135 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 ENDOGQ14249 297 aaKnown RBP12.07□□□□□ -0.48
CNOT3-210ENST00000618939 ALKBH6Q3KRA9 238 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 IGSF11Q5DX21 431 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 ZNF574Q6ZN55 896 aaPredicted RBP12.07□□□□□ -0.48
CNOT3-210ENST00000618939 C1QL2Q7Z5L3 287 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 OR51I2Q9H344 312 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 R4GN57 208 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 IGLV3-12A0A075B6K2 115 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 HLA-DRB3P79483 266 aa12.07□□□□□ -0.48
CNOT3-210ENST00000618939 FAM3AP98173 230 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms