RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 C12orf49Q9H741 205 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 V9GYS6 101 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 PKIAP61925 76 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 ZNF816Q0VGE8 651 aaPredicted RBP9.18□□□□□ -0.94
USB1-212ENST00000566082 PNRC1Q12796 327 aaPredicted RBP9.18□□□□□ -0.94
USB1-212ENST00000566082 SPATA46Q5T0L3 261 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 RNF144BQ7Z419 303 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 SP7Q8TDD2 431 aaPredicted RBP9.18□□□□□ -0.94
USB1-212ENST00000566082 NANOS1Q8WY41 292 aaKnown RBP9.18□□□□□ -0.94
USB1-212ENST00000566082 RAB40CQ96S21 281 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 SIRT7Q9NRC8 400 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 GPR27Q9NS67 375 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 GNG12Q9UBI6 72 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 ABCA7Q8IZY2 2146 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 RALGAPA1Q6GYQ0 2036 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 TCAPO15273 167 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 RAMP1O60894 148 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 COX5AP20674 150 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 GAMTQ14353 236 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 PLPPR5Q32ZL2 321 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 WIPI1Q5MNZ9 446 aaPredicted RBP9.18□□□□□ -0.94
USB1-212ENST00000566082 H2BFWTQ7Z2G1 175 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 CLDN23Q96B33 292 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 VWCEQ96DN2 955 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 TXN2Q99757 166 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 BARX1Q9HBU1 254 aaPredicted RBP9.18□□□□□ -0.94
USB1-212ENST00000566082 AURKAIP1Q9NWT8 199 aaPredicted RBP9.18□□□□□ -0.94
USB1-212ENST00000566082 UNC80Q8N2C7 3258 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 RANBP2P49792 3224 aaKnown RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 TRDCB7Z8K6 153 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 CXCL12P48061 93 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 CLDN15P56746 228 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 ZNF90Q03938 601 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 COL13A1Q5TAT6 717 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 WDR25Q64LD2 544 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 ZNF385CQ66K41 422 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 OR1K1Q8NGR3 316 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 PINX1Q96BK5 328 aaKnown RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 ZDHHC11Q9H8X9 412 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 TREM2Q9NZC2 230 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 PRSS50Q9UI38 385 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 A0A1W2PNV4 684 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 AQP7P3A6NL99 342 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 FAM166BA8MTA8 275 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 C5orf67F2Z3F1 127 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 MT-CO2P00403 227 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 POU2F2P09086 479 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 TRGC1P0CF51 173 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 FAM157CP0CG43 387 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 DDTP30046 118 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 RPS23P62266 143 aaKnown RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 SLC38A11Q08AI6 406 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 EDDM3AQ14507 147 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 LPAL2Q16609 132 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 Q3ZCU0 254 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 LYSMD4Q5XG99 296 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 DBX2Q6ZNG2 339 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 PLPPR2Q96GM1 343 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 FAM103A1Q9BTL3 118 aaKnown RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 DUSP15Q9H1R2 295 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 LIN7CQ9NUP9 197 aaKnown RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 BOKQ9UMX3 212 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 FUT9Q9Y231 359 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 CEP250Q9BV73 2442 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 A0A0A6YYD4 124 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 C2CD4DB7Z1M9 353 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 DVL1O14640 695 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 TRAF3IP2O43734 574 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 PRF1P14222 555 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 DSCR4P56555 118 aaPredicted RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 SUPT4H1P63272 117 aaKnown RBP9.17□□□□□ -0.94
USB1-212ENST00000566082 IQCJQ1A5X6 159 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 KHDC3LQ587J8 217 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 OR10AD1Q8NGE0 317 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 IL22RA2Q969J5 263 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 UHRF2Q96PU4 802 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 PLXNA4Q9HCM2 1894 aa9.17□□□□□ -0.94
USB1-212ENST00000566082 EYSQ5T1H1 3165 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 CACNA1EQ15878 2313 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 SYNGR2O43760 224 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 CBR3O75828 277 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 MBP02144 154 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
USB1-212ENST00000566082 PRDX4Q13162 271 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 EXT1Q16394 746 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 IZUMO4Q1ZYL8 232 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 SNAI3Q3KNW1 292 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 FNDC7Q5VTL7 733 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 RHBDD2Q6NTF9 364 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 LINC00696Q6ZRV3 163 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 KMT5CQ86Y97 462 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 BMPERQ8N8U9 685 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 ABHD14AQ9BUJ0 271 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 PITPNC1Q9UKF7 332 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 IGHV1OR15-9A0A0B4J2B8 117 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 C9JQL5 133 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms