RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 FAM90A15PP0C7V4 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A13PP0C7W8 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A14PP0C7W9 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A24PP0C7X0 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 CGB3P0DN86 165 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 CGB7P0DN87 165 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 MTNR1BP49286 362 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 KRTAP10-11P60412 298 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 ZP1P60852 638 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 KISS1Q15726 138 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 DEFB121Q5J5C9 76 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 UTF1Q5T230 341 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 SERPINA12Q8IW75 414 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 OR51T1Q8NGJ9 327 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 TOMM40LQ969M1 308 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 GPR61Q9BZJ8 451 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 EXOGQ9Y2C4 368 aaKnown RBP18.08■□□□□ 0.49
USP42-205ENST00000465073 ORC6Q9Y5N6 252 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 PSMB11A5LHX3 300 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 ATP5HO75947 161 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 EGFEM1PQ0D2K5 195 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 LINC00482Q8N8I6 264 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 LINC00574Q9H8X3 128 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 H0YJX3 145 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 J3QR06 171 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 SULT1B1O43704 296 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 ELP2Q6IA86 826 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 PARP16Q8N5Y8 322 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 OR51D1Q8NGF3 324 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 BARHL1Q9BZE3 327 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 CALYQ9NYX4 217 aa18.07■□□□□ 0.48
USP42-205ENST00000465073 NBEAL2Q6ZNJ1 2754 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 MEIKINA0A087WXM9 373 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 WI2-2373I1.2A0A1W2PRP0 233 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 ALPLP05186 524 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 SNRNP70P08621 437 aaKnown RBP18.06■□□□□ 0.48
USP42-205ENST00000465073 C21orf33P30042 268 aaPredicted RBP18.06■□□□□ 0.48
USP42-205ENST00000465073 GLP1RP43220 463 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 GALEQ14376 348 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 PAN3Q58A45 887 aaKnown RBP18.06■□□□□ 0.48
USP42-205ENST00000465073 ZNF691Q5VV52 312 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 KIF25Q9UIL4 384 aa18.06■□□□□ 0.48
USP42-205ENST00000465073 HSPB6O14558 160 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 MADCAM1Q13477 382 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 ZNF329Q86UD4 541 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 MRPL41Q8IXM3 137 aaKnown RBP18.05■□□□□ 0.48
USP42-205ENST00000465073 SYS1Q8N2H4 156 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 PXT1Q8NFP0 134 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 OR13A1Q8NGR1 328 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 OR56B4Q8NH76 319 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 CHPT1Q8WUD6 406 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 DPF1Q92782 380 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 LGALS12Q96DT0 336 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 CPNE2Q96FN4 548 aaPredicted RBP18.05■□□□□ 0.48
USP42-205ENST00000465073 NR1H4Q96RI1 486 aaPredicted RBP18.05■□□□□ 0.48
USP42-205ENST00000465073 ALG8Q9BVK2 526 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 IDI2-AS1Q9NZ38 188 aa18.05■□□□□ 0.48
USP42-205ENST00000465073 TRAV24A0A0B4J272 114 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 TMEM212A6NML5 194 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 ZFPL1O95159 310 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 IL1AP01583 271 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 RAB7AP51149 207 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 SLC16A12Q6ZSM3 486 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 LHFPL3Q86UP9 236 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 OR8H3Q8N146 312 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 DRAM1Q8N682 238 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 CNIH3Q8TBE1 160 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 HAVCR2Q8TDQ0 301 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 ZNF649Q9BS31 505 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 PSG11Q9UQ72 335 aa18.04■□□□□ 0.48
USP42-205ENST00000465073 COL7A1Q02388 2944 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 A0A1W2PPI3 338 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 NPIPB11E5RHQ5 1161 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 E9PQ18 207 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 CIB2O75838 187 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 TMEM11P17152 192 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 SLC6A1P30531 599 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 HOXD3P31249 432 aaPredicted RBP18.03■□□□□ 0.48
USP42-205ENST00000465073 RPL23AP62750 156 aaKnown RBP18.03■□□□□ 0.48
USP42-205ENST00000465073 PAX5Q02548 391 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 MRPL28Q13084 256 aaKnown RBP18.03■□□□□ 0.48
USP42-205ENST00000465073 HES1Q14469 280 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 ETV3LQ6ZN32 361 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 C5orf56Q8N8D9 126 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 OR10A7Q8NGE5 316 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 OR5AK2Q8NH90 309 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 LEAP2Q969E1 77 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 MCRIP2Q9BUT9 160 aaKnown RBP18.03■□□□□ 0.48
USP42-205ENST00000465073 ISG20L2Q9H9L3 353 aaKnown RBP18.03■□□□□ 0.48
USP42-205ENST00000465073 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.03■□□□□ 0.486e-7■■■□□ 14.8
USP42-205ENST00000465073 ZFP57Q9NU63 452 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 DHDHQ9UQ10 334 aa18.03■□□□□ 0.48
USP42-205ENST00000465073 FGF16O43320 207 aa18.02■□□□□ 0.48
USP42-205ENST00000465073 IGHV3-7P01780 117 aa18.02■□□□□ 0.48
USP42-205ENST00000465073 KCNJ3P48549 501 aa18.02■□□□□ 0.48
USP42-205ENST00000465073 THBS3P49746 956 aa18.02■□□□□ 0.48
USP42-205ENST00000465073 IL13RA2Q14627 380 aa18.02■□□□□ 0.48
USP42-205ENST00000465073 ZIK1Q3SY52 487 aaPredicted RBP18.02■□□□□ 0.48
USP42-205ENST00000465073 FAM53CQ9NYF3 392 aa18.02■□□□□ 0.48
USP42-205ENST00000465073 EI24O14681 340 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms