RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 DPAGT1Q9H3H5 408 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 TMEM165Q9HC07 324 aa11.46□□□□□ -0.57
VAPB-202ENST00000395802 TRBV6-6A0A0A6YYG2 114 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 KIR2DS1A0A191URI9 304 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 SSX5O60225 188 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 NAT1P18440 290 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 GIFP27352 417 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 CDKN1AP38936 164 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 KIR2DS4P43632 304 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 IL13RA1P78552 427 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 KIR2DS1Q14954 304 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 DEFB108BQ8NET1 73 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 BEST4Q8NFU0 473 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 OR5T2Q8NGG2 359 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 NEURL2Q9BR09 285 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 ST6GALNAC5Q9BVH7 336 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 ZNF286AQ9HBT8 521 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 BARX1Q9HBU1 254 aaPredicted RBP11.46□□□□□ -0.58
VAPB-202ENST00000395802 COPZ2Q9P299 210 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 ZNF222Q9UK12 451 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 ANAPC10Q9UM13 185 aa11.46□□□□□ -0.58
VAPB-202ENST00000395802 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.58
VAPB-202ENST00000395802 DSCAMO60469 2012 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 USP9YO00507 2555 aaPredicted RBP11.45□□□□□ -0.58
VAPB-202ENST00000395802 HELZ2Q9BYK8 2649 aaKnown RBP11.45□□□□□ -0.58
VAPB-202ENST00000395802 IGHV3OR15-7A0A075B7D8 119 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 K7N7A8 449 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 MGST3O14880 152 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 NAPSAO96009 420 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 TCRBP04435 133 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 FCGR3AP08637 254 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 AMY2BP19961 511 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 COL8A2P25067 703 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 CCR6P51684 374 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 GRK1Q15835 563 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 CHRFAM7AQ494W8 412 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 SLC35E4Q6ICL7 350 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 FAAP20Q6NZ36 180 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 STEAP1BQ6NZ63 245 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 ZNF788Q6ZQV5 615 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 Q6ZS49 121 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 CD177Q8N6Q3 437 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 OR4K15Q8NH41 348 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 CYYR1Q96J86 154 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 PPA2Q9H2U2 334 aa11.45□□□□□ -0.58
VAPB-202ENST00000395802 HRNRQ86YZ3 2850 aaPredicted RBP11.45□□□□□ -0.58
VAPB-202ENST00000395802 SIGLEC5O15389 551 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 TMPRSS2O15393 492 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 PSPNO60542 156 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 ZNF737O75373 536 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 GYPAP02724 150 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 IFNA6P05013 189 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 OR3A3P47888 321 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 ARPC4P59998 168 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 RNASE10Q5GAN6 216 aaKnown RBP11.44□□□□□ -0.58
VAPB-202ENST00000395802 RSBN1Q5VWQ0 802 aaPredicted RBP11.44□□□□□ -0.58
VAPB-202ENST00000395802 ZNF497Q6ZNH5 498 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 GAPTQ8N292 157 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 OR4C16Q8NGL9 310 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 NUDT15Q9NV35 164 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 ZNF581Q9P0T4 197 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 KAAG1Q9UBP8 84 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 LRBAP50851 2863 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 TANC2Q9HCD6 1990 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 DISC1C4P0D8 188 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 RP2O75695 350 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 RAB3DO95716 219 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 TK1P04183 234 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 CD74P04233 296 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 CD3DP04234 171 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 HLA-DMAP28067 261 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 CEBPDP49716 269 aaPredicted RBP11.44□□□□□ -0.58
VAPB-202ENST00000395802 ATXN7L3Q14CW9 347 aaPredicted RBP11.44□□□□□ -0.58
VAPB-202ENST00000395802 ZMYND11Q15326 602 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 TATDN3Q17R31 274 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 C11orf91Q3C1V1 193 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 TMEM155Q4W5P6 130 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 LRRC10Q5BKY1 277 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 KRBOX4Q5JUW0 171 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 FAM201AQ5SY85 155 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 TRAT1Q6PIZ9 186 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 C17orf107Q6ZR85 190 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 TMEM17Q86X19 198 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 ZNF295-AS1Q8N0V1 137 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 SPICQ8N5J4 248 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 GVQW1Q8N7I0 195 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 ZNF565Q8N9K5 539 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 OR4D10Q8NGI6 311 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 OR5H2Q8NGV7 314 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 CHAC2Q8WUX2 184 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 IGFBPL1Q8WX77 278 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 NCOR1P1Q9H4R4 102 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 RAB9BQ9NP90 201 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 MCUBQ9NWR8 336 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 KCNIP1Q9NZI2 227 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 ANXA10Q9UJ72 324 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 SCP2D1Q9UJQ7 156 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms