RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	DUS3	Q06053	668 aa	Known RBP	4.65	□□□□□ -1.67
RET3	YPL010W	ENB1	Q08299	606 aa		4.65	□□□□□ -1.67
RET3	YPL010W	CLF1	Q12309	687 aa	Predicted RBP	4.65	□□□□□ -1.67
RET3	YPL010W	KCS1	Q12494	1050 aa		4.65	□□□□□ -1.67
RET3	YPL010W	TOR1	P35169	2470 aa		4.65	□□□□□ -1.67
RET3	YPL010W	SPE1	P08432	466 aa		4.64	□□□□□ -1.67
RET3	YPL010W	ENA1	P13587	1091 aa		4.64	□□□□□ -1.67
RET3	YPL010W	POL3	P15436	1097 aa		4.64	□□□□□ -1.67
RET3	YPL010W	AGP1	P25376	633 aa		4.64	□□□□□ -1.67
RET3	YPL010W	SBA1	P28707	216 aa	Known RBP	4.64	□□□□□ -1.67
RET3	YPL010W	NMD2	P38798	1089 aa	Known RBP	4.64	□□□□□ -1.67
RET3	YPL010W	SCS3	P53012	380 aa		4.64	□□□□□ -1.67
RET3	YPL010W	VID30	P53076	958 aa		4.64	□□□□□ -1.67
RET3	YPL010W	ENA2	Q01896	1091 aa		4.64	□□□□□ -1.67
RET3	YPL010W	VPS30	Q02948	557 aa		4.64	□□□□□ -1.67
RET3	YPL010W	SKY1	Q03656	742 aa		4.64	□□□□□ -1.67
RET3	YPL010W	GUP2	Q08929	609 aa		4.64	□□□□□ -1.67
RET3	YPL010W	ENA5	Q12691	1091 aa		4.64	□□□□□ -1.67
RET3	YPL010W	NUC1	P08466	329 aa		4.63	□□□□□ -1.67
RET3	YPL010W	MAS2	P11914	482 aa		4.63	□□□□□ -1.67
RET3	YPL010W	OPI1	P21957	404 aa		4.63	□□□□□ -1.67
RET3	YPL010W	PWP2	P25635	923 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	RPL8B	P29453	256 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	CDC12	P32468	407 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	FAA4	P47912	694 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	PSP2	P50109	593 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	LIF1	P53150	421 aa		4.63	□□□□□ -1.67
RET3	YPL010W	RPS15	Q01855	142 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	SRP1	Q02821	542 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	YMR321C	Q04898	105 aa		4.63	□□□□□ -1.67
RET3	YPL010W	BRE1	Q07457	700 aa	Known RBP	4.63	□□□□□ -1.67
RET3	YPL010W	CLN2	P20438	545 aa		4.62	□□□□□ -1.67
RET3	YPL010W	RIT1	P23796	513 aa		4.62	□□□□□ -1.67
RET3	YPL010W	FUB1	P25659	250 aa		4.62	□□□□□ -1.67
RET3	YPL010W	SYN8	P31377	255 aa		4.62	□□□□□ -1.67
RET3	YPL010W	HUL5	P53119	910 aa		4.62	□□□□□ -1.67
RET3	YPL010W	EMI2	Q04409	500 aa	Known RBP	4.62	□□□□□ -1.67
RET3	YPL010W	SVF1	Q05515	481 aa		4.62	□□□□□ -1.67
RET3	YPL010W	MMR1	Q06324	491 aa		4.62	□□□□□ -1.67
RET3	YPL010W	ATG11	Q12527	1178 aa		4.62	□□□□□ -1.67
RET3	YPL010W	NUM1	Q00402	2748 aa		4.61	□□□□□ -1.67
RET3	YPL010W	DUR1,2	P32528	1835 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	CHO2	P05374	869 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	PFK1	P16861	987 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	CAD1	P24813	409 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	YKR078W	P36158	585 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	CCC2	P38995	1004 aa		4.61	□□□□□ -1.67
RET3	YPL010W	SAH1	P39954	449 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	NPP2	P39997	493 aa		4.61	□□□□□ -1.67
RET3	YPL010W	HMF1	P40037	129 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	FMP10	P40098	244 aa		4.61	□□□□□ -1.67
RET3	YPL010W	TPM2	P40414	161 aa		4.61	□□□□□ -1.67
RET3	YPL010W	FMS1	P50264	508 aa		4.61	□□□□□ -1.67
RET3	YPL010W	MET13	P53128	600 aa		4.61	□□□□□ -1.67
RET3	YPL010W	PIB2	P53191	635 aa		4.61	□□□□□ -1.67
RET3	YPL010W	ART5	P53244	586 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	RPT6	Q01939	405 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	SHE9	Q04172	456 aa		4.61	□□□□□ -1.67
RET3	YPL010W	ECM16	Q04217	1267 aa	Known RBP	4.61	□□□□□ -1.67
RET3	YPL010W	SSF2	Q12153	453 aa	Predicted RBP	4.61	□□□□□ -1.67
RET3	YPL010W	RPL8A	P17076	256 aa	Known RBP	4.6	□□□□□ -1.67
RET3	YPL010W	PRO3	P32263	286 aa	Known RBP	4.6	□□□□□ -1.67
RET3	YPL010W	ANP1	P32629	500 aa		4.6	□□□□□ -1.67
RET3	YPL010W	SRP101	P32916	621 aa		4.6	□□□□□ -1.67
RET3	YPL010W	MYO3	P36006	1272 aa		4.6	□□□□□ -1.67
RET3	YPL010W	YBR238C	P38330	731 aa	Known RBP	4.6	□□□□□ -1.67
RET3	YPL010W	ALG2	P43636	503 aa		4.6	□□□□□ -1.67
RET3	YPL010W	GDE1	Q02979	1223 aa		4.6	□□□□□ -1.67
RET3	YPL010W	ESC2	Q06340	456 aa		4.6	□□□□□ -1.67
RET3	YPL010W	AIM39	Q08223	395 aa		4.6	□□□□□ -1.67
RET3	YPL010W	PIN2	Q12057	282 aa		4.6	□□□□□ -1.67
RET3	YPL010W	NPC2	Q12408	173 aa		4.6	□□□□□ -1.67
RET3	YPL010W	SES1	P07284	462 aa	Known RBP	4.59	□□□□□ -1.67
RET3	YPL010W	MSD1	P15179	658 aa	Known RBP	4.59	□□□□□ -1.67
RET3	YPL010W	HRR25	P29295	494 aa	Known RBP	4.59	□□□□□ -1.67
RET3	YPL010W	RME1	P32338	300 aa	Known RBP	4.59	□□□□□ -1.67
RET3	YPL010W	ABD1	P32783	436 aa	Predicted RBP	4.59	□□□□□ -1.67
RET3	YPL010W	TVP23	P38962	199 aa		4.59	□□□□□ -1.67
RET3	YPL010W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RET3	YPL010W	RPS7B	P48164	190 aa	Known RBP	4.59	□□□□□ -1.67
RET3	YPL010W	MDR1	P53258	950 aa		4.59	□□□□□ -1.67
RET3	YPL010W	PTA1	Q01329	785 aa	Predicted RBP	4.59	□□□□□ -1.67
RET3	YPL010W	LAS17	Q12446	633 aa		4.59	□□□□□ -1.67
RET3	YPL010W	URK1	P27515	501 aa		4.58	□□□□□ -1.68
RET3	YPL010W	BUD2	P33314	1104 aa		4.58	□□□□□ -1.68
RET3	YPL010W	OAR1	P35731	278 aa		4.58	□□□□□ -1.68
RET3	YPL010W	TVP38	P36164	337 aa		4.58	□□□□□ -1.68
RET3	YPL010W	APN2	P38207	520 aa		4.58	□□□□□ -1.68
RET3	YPL010W	CRG1	P38892	291 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
RET3	YPL010W	MMF1	P40185	145 aa	Known RBP	4.58	□□□□□ -1.68
RET3	YPL010W	HUL4	P40985	892 aa		4.58	□□□□□ -1.68
RET3	YPL010W	YKE2	P52553	114 aa		4.58	□□□□□ -1.68
RET3	YPL010W	MRPS35	P53292	345 aa		4.58	□□□□□ -1.68
RET3	YPL010W	YNL034W	P53963	612 aa		4.58	□□□□□ -1.68
RET3	YPL010W	YNL018C	P53976	612 aa		4.58	□□□□□ -1.68
RET3	YPL010W	MDM1	Q01846	1127 aa		4.58	□□□□□ -1.68
RET3	YPL010W	VPS16	Q03308	798 aa		4.58	□□□□□ -1.68
RET3	YPL010W	LCD1	Q04377	747 aa		4.58	□□□□□ -1.68
RET3	YPL010W	SPN1	Q06505	410 aa	Predicted RBP	4.58	□□□□□ -1.68
RET3	YPL010W	TEL1	P38110	2787 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms