RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	CCT3	P39077	534 aa	Known RBP	4.97	□□□□□ -1.61
FDH1	YOR388C	POB3	Q04636	552 aa	Known RBP	4.97	□□□□□ -1.61
FDH1	YOR388C	FPR4	Q06205	392 aa	Predicted RBP	4.97	□□□□□ -1.61
FDH1	YOR388C	APT2	P36973	181 aa		4.96	□□□□□ -1.62
FDH1	YOR388C	LYS9	P38999	446 aa		4.96	□□□□□ -1.62
FDH1	YOR388C	REC102	Q02721	264 aa		4.96	□□□□□ -1.62
FDH1	YOR388C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.96	□□□□□ -1.62
FDH1	YOR388C	CDC43	P18898	376 aa		4.95	□□□□□ -1.62
FDH1	YOR388C	CBR1	P38626	284 aa	Known RBP	4.95	□□□□□ -1.62
FDH1	YOR388C	FMO1	P38866	432 aa		4.95	□□□□□ -1.62
FDH1	YOR388C	NUP60	P39705	539 aa		4.95	□□□□□ -1.62
FDH1	YOR388C	GID8	P40208	455 aa		4.95	□□□□□ -1.62
FDH1	YOR388C	PCL10	P53124	433 aa		4.95	□□□□□ -1.62
FDH1	YOR388C	YNR029C	P53729	429 aa	Known RBP	4.95	□□□□□ -1.62
FDH1	YOR388C	ORC1	P54784	914 aa	Predicted RBP	4.95	□□□□□ -1.62
FDH1	YOR388C	SMX3	P54999	86 aa	Predicted RBP	4.95	□□□□□ -1.62
FDH1	YOR388C	YKL033W-A	Q86ZR7	236 aa		4.95	□□□□□ -1.62
FDH1	YOR388C	HRP1	Q99383	534 aa	Known RBP	4.95	□□□□□ -1.62
FDH1	YOR388C	MET6	P05694	767 aa	Known RBP	4.94	□□□□□ -1.62
FDH1	YOR388C	RAD18	P10862	487 aa		4.94	□□□□□ -1.62
FDH1	YOR388C	GFA1	P14742	717 aa	Known RBP	4.94	□□□□□ -1.62
FDH1	YOR388C	ERG6	P25087	383 aa	Known RBP	4.94	□□□□□ -1.62
FDH1	YOR388C	PCL2	P25693	308 aa		4.94	□□□□□ -1.62
FDH1	YOR388C	ENP1	P38333	483 aa	Known RBP	4.94	□□□□□ -1.62
FDH1	YOR388C	HMO1	Q03973	246 aa	Known RBP	4.94	□□□□□ -1.62
FDH1	YOR388C	ATG33	Q06485	197 aa		4.94	□□□□□ -1.62
FDH1	YOR388C	NTG2	Q08214	380 aa		4.94	□□□□□ -1.62
FDH1	YOR388C	RAD9	P14737	1309 aa		4.94	□□□□□ -1.62
FDH1	YOR388C	KIN3	P22209	435 aa		4.93	□□□□□ -1.62
FDH1	YOR388C	MVD1	P32377	396 aa	Known RBP	4.93	□□□□□ -1.62
FDH1	YOR388C	PAN2	P53010	1115 aa	Predicted RBP	4.93	□□□□□ -1.62
FDH1	YOR388C	VPS73	P53142	486 aa	Known RBP	4.93	□□□□□ -1.62
FDH1	YOR388C	SUT2	Q12286	268 aa		4.93	□□□□□ -1.62
FDH1	YOR388C	HAP1	P0CE41	1502 aa		4.92	□□□□□ -1.62
FDH1	YOR388C	PYC1	P11154	1178 aa	Known RBP	4.92	□□□□□ -1.62
FDH1	YOR388C	PCM1	P38628	557 aa	Known RBP	4.92	□□□□□ -1.62
FDH1	YOR388C	SFB3	P38810	929 aa		4.92	□□□□□ -1.62
FDH1	YOR388C	NDC80	P40460	691 aa		4.92	□□□□□ -1.62
FDH1	YOR388C	UBC9	P50623	157 aa	Predicted RBP	4.92	□□□□□ -1.62
FDH1	YOR388C	ARP4	P80428	489 aa		4.92	□□□□□ -1.62
FDH1	YOR388C	GIN4	Q12263	1142 aa		4.92	□□□□□ -1.62
FDH1	YOR388C	SFL1	P20134	766 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	RNR1	P21524	888 aa	Known RBP	4.91	□□□□□ -1.62
FDH1	YOR388C	PEX1	P24004	1043 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	TDP1	P38319	544 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	GET2	P40056	285 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	DOT6	P40059	670 aa	Known RBP	4.91	□□□□□ -1.62
FDH1	YOR388C	TAH11	P47112	604 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	FHN1	P53279	174 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	TAF3	Q12297	353 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	RAV1	P47104	1357 aa		4.91	□□□□□ -1.62
FDH1	YOR388C	HMG1	P12683	1054 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	HCA4	P20448	770 aa	Known RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	DMC1	P25453	334 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	CCR4	P31384	837 aa	Known RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	RRP14	P36080	434 aa	Known RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	TAF5	P38129	798 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	CRP1	P38845	465 aa	Known RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
FDH1	YOR388C	YJL206C	P39529	758 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	SET2	P46995	733 aa	Known RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	CTR1	P49573	406 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	AIM14	P53109	570 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	LEE1	Q02799	301 aa	Known RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	YML122C	Q03207	126 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	YLR001C	Q07895	862 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	CLF1	Q12309	687 aa	Predicted RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	RTC1	Q08281	1341 aa		4.9	□□□□□ -1.63
FDH1	YOR388C	CFT1	Q06632	1357 aa	Known RBP	4.9	□□□□□ -1.63
FDH1	YOR388C	MNN4	P36044	1178 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	APN2	P38207	520 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	UBS1	P38290	277 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	SSZ1	P38788	538 aa	Known RBP	4.89	□□□□□ -1.63
FDH1	YOR388C	ATF1	P40353	525 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	ARG2	P40360	574 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	NOP9	P47077	666 aa	Known RBP	4.89	□□□□□ -1.63
FDH1	YOR388C	ATG4	P53867	494 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	YNL193W	P53870	558 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	RGC1	Q06108	1083 aa	Known RBP	4.89	□□□□□ -1.63
FDH1	YOR388C	ZRT2	Q12436	422 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	SPT7	P35177	1332 aa		4.89	□□□□□ -1.63
FDH1	YOR388C	PHO11	P35842	467 aa		4.88	□□□□□ -1.63
FDH1	YOR388C	GLG1	P36143	616 aa		4.88	□□□□□ -1.63
FDH1	YOR388C	PHO12	P38693	467 aa		4.88	□□□□□ -1.63
FDH1	YOR388C	CCT7	P42943	550 aa	Known RBP	4.88	□□□□□ -1.63
FDH1	YOR388C	BRE5	P53741	515 aa	Known RBP	4.88	□□□□□ -1.63
FDH1	YOR388C	DIA2	Q08496	732 aa	Predicted RBP	4.88	□□□□□ -1.63
FDH1	YOR388C	YLR419W	Q06698	1435 aa	Known RBP	4.88	□□□□□ -1.63
FDH1	YOR388C	CUE2	P36075	443 aa	Known RBP	4.87	□□□□□ -1.63
FDH1	YOR388C	AKL1	P38080	1108 aa	Known RBP	4.87	□□□□□ -1.63
FDH1	YOR388C	YIL166C	P40445	542 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	RSC8	P43609	557 aa	Known RBP	4.87	□□□□□ -1.63
FDH1	YOR388C	YJR039W	P47107	1121 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	MET13	P53128	600 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	RNH70	P53331	553 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	TFB2	Q02939	513 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	MLH3	Q12083	715 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	NDJ1	Q12366	352 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	ENT1	Q12518	454 aa		4.87	□□□□□ -1.63
FDH1	YOR388C	BCK1	Q01389	1478 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms