RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	SKS1	Q12505	502 aa		2.64	□□□□□ -1.99
TOP2	YNL088W	CDC9	P04819	755 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	COX11	P19516	300 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	ADE2	P21264	571 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	SBA1	P28707	216 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	PSO2	P30620	661 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	MEI5	P32489	222 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	RPT3	P33298	428 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	RSM22	P36056	628 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	APE3	P37302	537 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	SEA4	P38164	1038 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	ATG14	P38270	344 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	GIP4	P39732	760 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	EMP65	P40085	556 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	FIG4	P42837	879 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	YJR039W	P47107	1121 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	SGF73	P53165	657 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	DCP2	P53550	970 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	SNF12	P53628	566 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	MOT3	P54785	490 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	PRO2	P54885	456 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	SPP1	Q03012	353 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	DON1	Q05610	365 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	ORM2	Q06144	216 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	GUD1	Q07729	489 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	RBD2	Q12270	262 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	RTN2	Q12443	393 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	TDH1	P00360	332 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	ARG3	P05150	338 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	PRB1	P09232	635 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	FUS3	P16892	353 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	PRE8	P23639	250 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	YJU2	P28320	278 aa	Predicted RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	SIP3	P38717	1229 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	TCD1	P38756	429 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	AXL2	P38928	823 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	RVS167	P39743	482 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	EMW1	P42842	904 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	GZF3	P42944	551 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	ARE2	P53629	642 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
TOP2	YNL088W	UTP5	Q04177	643 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	DSE3	Q08729	430 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	HAL9	Q12180	1030 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	RVB2	Q12464	471 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	SFL1	P20134	766 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	CWH43	P25618	953 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	NPR2	P39923	615 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	SLN1	P39928	1220 aa	Predicted RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	TEP1	P53916	434 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	RPT6	Q01939	405 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	MGR3	Q04472	501 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	UFO1	Q04511	668 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	RSC3	Q06639	885 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	INP54	Q08227	384 aa	Known RBP	2.63	□□□□□ -1.99
TOP2	YNL088W	SGS1	P35187	1447 aa		2.63	□□□□□ -1.99
TOP2	YNL088W	ARG81	P05085	880 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	RPS3	P05750	240 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	YER152C	P10356	443 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	GUK1	P15454	187 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	RAD53	P22216	821 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	CAD1	P24813	409 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	SGF29	P25554	259 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	SHM2	P37291	469 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	CCC2	P38995	1004 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	LYS14	P40971	790 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	LOC1	P43586	204 aa	Predicted RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	TOM22	P49334	152 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	ASE1	P50275	885 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	ECM18	Q04623	453 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	ECM38	Q05902	660 aa	Predicted RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	PEX15	Q08215	383 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
TOP2	YNL088W	SNF1	P06782	633 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	STE3	P06783	470 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	STE6	P12866	1290 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	OSM1	P21375	501 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	PAP1	P29468	568 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	MCM5	P29496	775 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	GCS1	P35197	352 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	DID4	P36108	232 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	MNL1	P38888	796 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	YIL077C	P40508	320 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	YRB2	P40517	327 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	FET5	P43561	622 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	KRE33	P53914	1056 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	SMA1	Q02651	245 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	YPL109C	Q02981	657 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	SRC1	Q03707	834 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	YLR225C	Q05948	407 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	PML1	Q07930	204 aa	Predicted RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	HER1	Q12276	1246 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	TPK1	P06244	397 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	TOP3	P13099	656 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	SRP54	P20424	541 aa	Known RBP	2.62	□□□□□ -1.99
TOP2	YNL088W	BOS1	P25385	244 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	PCL2	P25693	308 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	ADK2	P26364	225 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	PHO91	P27514	894 aa		2.62	□□□□□ -1.99
TOP2	YNL088W	MSP1	P28737	362 aa		2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms