RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	NDE2	Q07500	545 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	THP3	Q12049	470 aa	Known RBP	4.28	□□□□□ -1.72
YSH1	YLR277C	HXK1	P04806	485 aa	Known RBP	4.28	□□□□□ -1.72
YSH1	YLR277C	FUR4	P05316	633 aa	Known RBP	4.28	□□□□□ -1.72
YSH1	YLR277C	FBP1	P09201	348 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	MSD1	P15179	658 aa	Known RBP	4.28	□□□□□ -1.72
YSH1	YLR277C	MRP4	P32902	394 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	MOT2	P34909	587 aa	Known RBP	4.28	□□□□□ -1.72
YSH1	YLR277C	OCT1	P35999	772 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	YKL069W	P36088	180 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	POP7	P38291	140 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	SDH8	P38345	138 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	JLP2	P40206	208 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	RTS2	P40962	232 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	YGL082W	P53155	381 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	NAF1	P53919	492 aa	Known RBP	4.28	□□□□□ -1.72
YSH1	YLR277C	RSC4	Q02206	625 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	GFD1	Q04839	188 aa	Known RBP	4.28	□□□□□ -1.72
YSH1	YLR277C	COX20	Q04935	205 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	SDH5	Q08230	162 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	ATP16	Q12165	160 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	BBP1	Q12365	385 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	CMC2	Q3E7A4	109 aa		4.28	□□□□□ -1.72
YSH1	YLR277C	CET1	O13297	549 aa	Predicted RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	STF1	P01098	86 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	HOM2	P13663	365 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	NMT1	P14743	455 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	CYC8	P14922	966 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	DBP3	P20447	523 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	ADE2	P21264	571 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	RAD53	P22216	821 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	MIH1	P23748	554 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	GFD2	P25370	566 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	IMP2'	P32351	346 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	HIR1	P32479	840 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	SCT1	P32784	759 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	AFG2	P32794	780 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	KEL1	P38853	1164 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	PRM9	P39551	298 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	AIM9	P40053	627 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	GPD2	P41911	440 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	HXT10	P43581	546 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	MNN11	P46985	422 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	RPA14	P50106	137 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	TGL2	P54857	326 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	HER2	Q03557	464 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	PRP42	Q03776	544 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	FAR8	Q05040	523 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	RBS1	Q05672	457 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	REH1	Q06709	432 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	DTD1	Q07648	150 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	YPD1	Q07688	167 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	CUE5	Q08412	411 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	VHS3	Q08438	674 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	YOS9	Q99220	542 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	TUS1	Q06412	1307 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	TRL1	P09880	827 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	MSS116	P15424	664 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	KAR2	P16474	682 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	YPK2	P18961	677 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	PEX1	P24004	1043 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	LOS1	P33418	1100 aa	Predicted RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	CPR5	P35176	225 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	PGM2	P37012	569 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	AMN1	P38285	549 aa	Predicted RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	SOH1	P38633	127 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	YHR054C	P38780	354 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	PAN5	P38787	379 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	FCY21	P40039	528 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	RRD1	P40454	393 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	QRI1	P43123	477 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	MNT2	P53059	558 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	RPN14	P53196	417 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	MRPL50	P53724	139 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	YKR005C	Q02203	525 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	SSL1	Q04673	461 aa	Predicted RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	RTN1	Q04947	295 aa	Known RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	SMF3	Q12078	473 aa	Predicted RBP	4.27	□□□□□ -1.73
YSH1	YLR277C	LAG2	Q92325	660 aa		4.27	□□□□□ -1.73
YSH1	YLR277C	IQG1	Q12280	1495 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	YPR089W	O13585	888 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	BI4	P03879	638 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	THR1	P17423	357 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	RRP43	P25359	394 aa	Predicted RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	ZIP1	P31111	875 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	GUT2	P32191	649 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	EFT1	P32324	842 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	CDC12	P32468	407 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	SQT1	P35184	431 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	KES1	P35844	434 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	PXL1	P36166	706 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	VMA22	P38784	181 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	FLC2	P39719	783 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	RVS167	P39743	482 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	MKT1	P40850	830 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	GPP1	P41277	250 aa	Known RBP	4.26	□□□□□ -1.73
YSH1	YLR277C	GCV2	P49095	1034 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	SAM50	P53969	484 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	UBX4	P54730	416 aa		4.26	□□□□□ -1.73
YSH1	YLR277C	MFM1	Q02783	413 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms