RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W PEX19Q07418 342 aa1.62□□□□□ -2.15
SMC1YFL008W GPP2P40106 250 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W ELO3P40319 345 aa1.62□□□□□ -2.15
SMC1YFL008W UBC9P50623 157 aaPredicted RBP1.62□□□□□ -2.15
SMC1YFL008W PCL10P53124 433 aa1.62□□□□□ -2.15
SMC1YFL008W USA1Q03714 838 aa1.62□□□□□ -2.15
SMC1YFL008W ALG7P07286 448 aa1.62□□□□□ -2.15
SMC1YFL008W RNR1P21524 888 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W HRR25P29295 494 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W PEX6P33760 1030 aa1.62□□□□□ -2.15
SMC1YFL008W KTR4P38131 464 aa1.62□□□□□ -2.15
SMC1YFL008W SAK1P38990 1142 aa1.62□□□□□ -2.15
SMC1YFL008W MUP1P50276 574 aa1.62□□□□□ -2.15
SMC1YFL008W HFD1Q04458 532 aa1.62□□□□□ -2.15
SMC1YFL008W VPS36Q06696 566 aa1.62□□□□□ -2.15
SMC1YFL008W YLR125WQ12138 136 aa1.62□□□□□ -2.15
SMC1YFL008W FAS2P19097 1887 aaKnown RBP1.62□□□□□ -2.15
SMC1YFL008W PRP45P28004 379 aaPredicted RBP1.61□□□□□ -2.15
SMC1YFL008W PRE4P30657 266 aa1.61□□□□□ -2.15
SMC1YFL008W MTH1P35198 433 aa1.61□□□□□ -2.15
SMC1YFL008W NOP7P53261 605 aaKnown RBP1.61□□□□□ -2.15
SMC1YFL008W FPR4Q06205 392 aaPredicted RBP1.61□□□□□ -2.15
SMC1YFL008W FRE5Q08908 694 aa1.61□□□□□ -2.15
SMC1YFL008W GEA1P47102 1408 aaPredicted RBP1.61□□□□□ -2.15
SMC1YFL008W TOM70P07213 617 aaKnown RBP1.61□□□□□ -2.15
SMC1YFL008W ENA1P13587 1091 aa1.61□□□□□ -2.15
SMC1YFL008W DAL3P32459 195 aa1.61□□□□□ -2.15
SMC1YFL008W YKU70P32807 602 aa1.61□□□□□ -2.15
SMC1YFL008W YKL091CP33324 310 aaKnown RBP1.61□□□□□ -2.15
SMC1YFL008W PAF1P38351 445 aa1.61□□□□□ -2.15
SMC1YFL008W HUL4P40985 892 aa1.61□□□□□ -2.15
SMC1YFL008W BIT61P47041 543 aa1.61□□□□□ -2.15
SMC1YFL008W ENA2Q01896 1091 aa1.61□□□□□ -2.15
SMC1YFL008W TFC6Q06339 672 aa1.61□□□□□ -2.15
SMC1YFL008W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SMC1YFL008W ENA5Q12691 1091 aa1.61□□□□□ -2.15
SMC1YFL008W SRB8P25648 1427 aa1.61□□□□□ -2.15
SMC1YFL008W SED4P25365 1065 aa1.61□□□□□ -2.15
SMC1YFL008W PPH3P32345 308 aa1.61□□□□□ -2.15
SMC1YFL008W OAF3P36023 863 aa1.61□□□□□ -2.15
SMC1YFL008W CRG1P38892 291 aaRIP-Chip data1.61□□□□□ -2.15not detected
SMC1YFL008W FMP52P40008 231 aa1.61□□□□□ -2.15
SMC1YFL008W KHA1P40309 873 aa1.61□□□□□ -2.15
SMC1YFL008W IRC5P43610 853 aa1.61□□□□□ -2.15
SMC1YFL008W YJR096WP47137 282 aa1.61□□□□□ -2.15
SMC1YFL008W PAN2P53010 1115 aaPredicted RBP1.61□□□□□ -2.15
SMC1YFL008W YLR407WQ06070 228 aa1.61□□□□□ -2.15
SMC1YFL008W OSH2Q12451 1283 aa1.61□□□□□ -2.15
SMC1YFL008W GAL11P19659 1081 aa1.6□□□□□ -2.15
SMC1YFL008W SRP40P32583 406 aaPredicted RBP1.6□□□□□ -2.15
SMC1YFL008W MAD2P40958 196 aa1.6□□□□□ -2.15
SMC1YFL008W NHX1Q04121 633 aa1.6□□□□□ -2.15
SMC1YFL008W DIN7Q12086 430 aa1.6□□□□□ -2.15
SMC1YFL008W TUB2P02557 457 aaKnown RBP1.6□□□□□ -2.15
SMC1YFL008W MET6P05694 767 aaKnown RBP1.6□□□□□ -2.15
SMC1YFL008W STE4P18851 423 aa1.6□□□□□ -2.15
SMC1YFL008W PEX1P24004 1043 aa1.6□□□□□ -2.15
SMC1YFL008W OAR1P35731 278 aa1.6□□□□□ -2.15
SMC1YFL008W YPT53P36019 220 aa1.6□□□□□ -2.15
SMC1YFL008W SET5P38890 526 aaKnown RBP1.6□□□□□ -2.15
SMC1YFL008W NUP60P39705 539 aa1.6□□□□□ -2.15
SMC1YFL008W YNL092WP53934 400 aa1.6□□□□□ -2.15
SMC1YFL008W TFB2Q02939 513 aa1.6□□□□□ -2.15
SMC1YFL008W OAF1P39720 1047 aaPredicted RBP1.6□□□□□ -2.15
SMC1YFL008W SNF7P39929 240 aaKnown RBP1.6□□□□□ -2.15
SMC1YFL008W AIM21P40563 679 aa1.6□□□□□ -2.15
SMC1YFL008W RNT1Q02555 471 aa1.6□□□□□ -2.15
SMC1YFL008W MCM21Q06675 368 aa1.6□□□□□ -2.15
SMC1YFL008W YDL124WQ07551 312 aaKnown RBP1.6□□□□□ -2.15
SMC1YFL008W CFT1Q06632 1357 aaKnown RBP1.6□□□□□ -2.15
SMC1YFL008W PDR11P40550 1411 aa1.6□□□□□ -2.15
SMC1YFL008W CPA2P03965 1118 aaKnown RBP1.59□□□□□ -2.15
SMC1YFL008W PYC1P11154 1178 aaKnown RBP1.59□□□□□ -2.15
SMC1YFL008W IMG2P25642 146 aaPredicted RBP1.59□□□□□ -2.15
SMC1YFL008W BCS1P32839 456 aa1.59□□□□□ -2.15
SMC1YFL008W STO1P34160 861 aaKnown RBP1.59□□□□□ -2.15
SMC1YFL008W YMC2P38087 329 aa1.59□□□□□ -2.15
SMC1YFL008W BIT2P38346 545 aa1.59□□□□□ -2.15
SMC1YFL008W NMD2P38798 1089 aaKnown RBP1.59□□□□□ -2.15
SMC1YFL008W VPS8P39702 1274 aa1.59□□□□□ -2.15
SMC1YFL008W NIT2P47016 307 aa1.59□□□□□ -2.15
SMC1YFL008W NOP15P53927 220 aaPredicted RBP1.59□□□□□ -2.15
SMC1YFL008W COG6P53959 839 aa1.59□□□□□ -2.15
SMC1YFL008W COG8Q04632 607 aa1.59□□□□□ -2.15
SMC1YFL008W GEP3Q08622 556 aa1.59□□□□□ -2.15
SMC1YFL008W ATG11Q12527 1178 aa1.59□□□□□ -2.15
SMC1YFL008W YLL066CQ99208 1374 aa1.59□□□□□ -2.16
SMC1YFL008W RPP2AP05319 106 aaKnown RBP1.59□□□□□ -2.16
SMC1YFL008W ACO1P19414 778 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
SMC1YFL008W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
SMC1YFL008W PHO11P35842 467 aa1.59□□□□□ -2.16
SMC1YFL008W PHO12P38693 467 aa1.59□□□□□ -2.16
SMC1YFL008W MNN1P39106 762 aa1.59□□□□□ -2.16
SMC1YFL008W FKH2P41813 862 aa1.59□□□□□ -2.16
SMC1YFL008W TAH11P47112 604 aa1.59□□□□□ -2.16
SMC1YFL008W YJR120WP47157 116 aa1.59□□□□□ -2.16
SMC1YFL008W PIP2P52960 996 aa1.59□□□□□ -2.16
SMC1YFL008W OMS1Q06668 471 aa1.59□□□□□ -2.16
SMC1YFL008W REH1Q06709 432 aa1.59□□□□□ -2.16
SMC1YFL008W IZH3Q07959 543 aa1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms