RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YBP2	P53169	641 aa		2.66	□□□□□ -1.98
DOT6	YER088C	TSC11	P40061	1430 aa		2.65	□□□□□ -1.98
DOT6	YER088C	VTH1	P40438	1549 aa		2.65	□□□□□ -1.98
DOT6	YER088C	VTH2	P40890	1549 aa		2.65	□□□□□ -1.98
DOT6	YER088C	PRP19	P32523	503 aa	Known RBP	2.65	□□□□□ -1.99
DOT6	YER088C	GZF3	P42944	551 aa	Known RBP	2.65	□□□□□ -1.99
DOT6	YER088C	NOP9	P47077	666 aa	Known RBP	2.65	□□□□□ -1.99
DOT6	YER088C	YGR237C	P50089	785 aa		2.65	□□□□□ -1.99
DOT6	YER088C	REC102	Q02721	264 aa		2.65	□□□□□ -1.99
DOT6	YER088C	MUK1	Q02866	612 aa		2.65	□□□□□ -1.99
DOT6	YER088C	RCR2	Q03446	210 aa	Known RBP	2.65	□□□□□ -1.99
DOT6	YER088C	GAD1	Q04792	585 aa		2.65	□□□□□ -1.99
DOT6	YER088C	URN1	Q06525	465 aa	Known RBP	2.65	□□□□□ -1.99
DOT6	YER088C	RPS21B	Q3E754	87 aa	Known RBP	2.65	□□□□□ -1.99
DOT6	YER088C	YOR1	P53049	1477 aa		2.65	□□□□□ -1.99
DOT6	YER088C	SWI6	P09959	803 aa		2.64	□□□□□ -1.99
DOT6	YER088C	IME1	P21190	360 aa		2.64	□□□□□ -1.99
DOT6	YER088C	TRZ1	P36159	838 aa	Predicted RBP	2.64	□□□□□ -1.99
DOT6	YER088C	MAL31	P38156	614 aa		2.64	□□□□□ -1.99
DOT6	YER088C	MOH1	P38191	138 aa		2.64	□□□□□ -1.99
DOT6	YER088C	UBS1	P38290	277 aa		2.64	□□□□□ -1.99
DOT6	YER088C	YHR202W	P38887	602 aa		2.64	□□□□□ -1.99
DOT6	YER088C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
DOT6	YER088C	OAF1	P39720	1047 aa	Predicted RBP	2.64	□□□□□ -1.99
DOT6	YER088C	YNL195C	P40168	261 aa		2.64	□□□□□ -1.99
DOT6	YER088C	PNS1	Q12412	539 aa		2.64	□□□□□ -1.99
DOT6	YER088C	APM4	Q99186	491 aa		2.64	□□□□□ -1.99
DOT6	YER088C	ULS1	Q08562	1619 aa		2.64	□□□□□ -1.99
DOT6	YER088C	TRM3	Q07527	1436 aa		2.64	□□□□□ -1.99
DOT6	YER088C	MYO4	P32492	1471 aa		2.64	□□□□□ -1.99
DOT6	YER088C	RPS21A	P0C0V8	87 aa	Known RBP	2.64	□□□□□ -1.99
DOT6	YER088C	PYC1	P11154	1178 aa	Known RBP	2.64	□□□□□ -1.99
DOT6	YER088C	CCT3	P39077	534 aa	Known RBP	2.64	□□□□□ -1.99
DOT6	YER088C	NUP60	P39705	539 aa		2.64	□□□□□ -1.99
DOT6	YER088C	FMP52	P40008	231 aa		2.64	□□□□□ -1.99
DOT6	YER088C	YLR407W	Q06070	228 aa		2.64	□□□□□ -1.99
DOT6	YER088C	YPS7	Q06325	596 aa		2.64	□□□□□ -1.99
DOT6	YER088C	THI22	Q06490	572 aa		2.64	□□□□□ -1.99
DOT6	YER088C	OMS1	Q06668	471 aa		2.64	□□□□□ -1.99
DOT6	YER088C	HFI1	Q12060	488 aa		2.64	□□□□□ -1.99
DOT6	YER088C	PEX1	P24004	1043 aa		2.63	□□□□□ -1.99
DOT6	YER088C	IMG2	P25642	146 aa	Predicted RBP	2.63	□□□□□ -1.99
DOT6	YER088C	YKU70	P32807	602 aa		2.63	□□□□□ -1.99
DOT6	YER088C	OAF3	P36023	863 aa		2.63	□□□□□ -1.99
DOT6	YER088C	APN2	P38207	520 aa		2.63	□□□□□ -1.99
DOT6	YER088C	TDA3	P38758	523 aa		2.63	□□□□□ -1.99
DOT6	YER088C	MNN11	P46985	422 aa	Known RBP	2.63	□□□□□ -1.99
DOT6	YER088C	FHN1	P53279	174 aa		2.63	□□□□□ -1.99
DOT6	YER088C	CTK1	Q03957	528 aa	Known RBP	2.63	□□□□□ -1.99
DOT6	YER088C	VPS36	Q06696	566 aa		2.63	□□□□□ -1.99
DOT6	YER088C	YTM1	Q12024	460 aa	Predicted RBP	2.63	□□□□□ -1.99
DOT6	YER088C	NUP145	P49687	1317 aa		2.63	□□□□□ -1.99
DOT6	YER088C	PDR12	Q02785	1511 aa		2.63	□□□□□ -1.99
DOT6	YER088C	OAR1	P35731	278 aa		2.63	□□□□□ -1.99
DOT6	YER088C	FAT1	P38225	669 aa		2.63	□□□□□ -1.99
DOT6	YER088C	YEN1	P40028	759 aa		2.63	□□□□□ -1.99
DOT6	YER088C	IES1	P43579	692 aa		2.63	□□□□□ -1.99
DOT6	YER088C	RSC8	P43609	557 aa	Known RBP	2.63	□□□□□ -1.99
DOT6	YER088C	YGR153W	P48238	217 aa		2.63	□□□□□ -1.99
DOT6	YER088C	STB4	P50104	949 aa		2.63	□□□□□ -1.99
DOT6	YER088C	PAN2	P53010	1115 aa	Predicted RBP	2.63	□□□□□ -1.99
DOT6	YER088C	YMR206W	Q03695	313 aa		2.63	□□□□□ -1.99
DOT6	YER088C	HFD1	Q04458	532 aa		2.63	□□□□□ -1.99
DOT6	YER088C	ISA1	Q07821	250 aa	Predicted RBP	2.63	□□□□□ -1.99
DOT6	YER088C	SGO1	Q08490	590 aa		2.63	□□□□□ -1.99
DOT6	YER088C	ECM3	Q99252	613 aa		2.63	□□□□□ -1.99
DOT6	YER088C	CDC26	P14724	124 aa		2.62	□□□□□ -1.99
DOT6	YER088C	BIT61	P47041	543 aa		2.62	□□□□□ -1.99
DOT6	YER088C	TEL2	P53038	688 aa		2.62	□□□□□ -1.99
DOT6	YER088C	NOP15	P53927	220 aa	Predicted RBP	2.62	□□□□□ -1.99
DOT6	YER088C	STP4	Q07351	490 aa		2.62	□□□□□ -1.99
DOT6	YER088C	FAP7	Q12055	197 aa	Predicted RBP	2.62	□□□□□ -1.99
DOT6	YER088C	YKL033W-A	Q86ZR7	236 aa		2.62	□□□□□ -1.99
DOT6	YER088C	SNQ2	P32568	1501 aa	Known RBP	2.62	□□□□□ -1.99
DOT6	YER088C	BUD3	P25558	1636 aa		2.61	□□□□□ -1.99
DOT6	YER088C	FRS1	P15624	595 aa	Known RBP	2.61	□□□□□ -1.99
DOT6	YER088C	DAL3	P32459	195 aa		2.61	□□□□□ -1.99
DOT6	YER088C	EUG1	P32474	517 aa		2.61	□□□□□ -1.99
DOT6	YER088C	MSS1	P32559	526 aa	Predicted RBP	2.61	□□□□□ -1.99
DOT6	YER088C	PET127	P32606	800 aa		2.61	□□□□□ -1.99
DOT6	YER088C	APT2	P36973	181 aa		2.61	□□□□□ -1.99
DOT6	YER088C	ENP1	P38333	483 aa	Known RBP	2.61	□□□□□ -1.99
DOT6	YER088C	PAF1	P38351	445 aa		2.61	□□□□□ -1.99
DOT6	YER088C	YHL017W	P38745	532 aa		2.61	□□□□□ -1.99
DOT6	YER088C	GPP2	P40106	250 aa	Known RBP	2.61	□□□□□ -1.99
DOT6	YER088C	GPD1	Q00055	391 aa	Known RBP	2.61	□□□□□ -1.99
DOT6	YER088C	TMN2	Q04562	672 aa		2.61	□□□□□ -1.99
DOT6	YER088C	MLH3	Q12083	715 aa		2.61	□□□□□ -1.99
DOT6	YER088C	ACF2	Q12168	779 aa		2.61	□□□□□ -1.99
DOT6	YER088C	DNF3	Q12674	1656 aa		2.61	□□□□□ -1.99
DOT6	YER088C	TSR4	P25040	408 aa		2.61	□□□□□ -1.99
DOT6	YER088C	SEC65	P29478	273 aa		2.61	□□□□□ -1.99
DOT6	YER088C	BCS1	P32839	456 aa		2.61	□□□□□ -1.99
DOT6	YER088C	SER1	P33330	395 aa	Known RBP	2.61	□□□□□ -1.99
DOT6	YER088C	PHO11	P35842	467 aa		2.61	□□□□□ -1.99
DOT6	YER088C	DID4	P36108	232 aa		2.61	□□□□□ -1.99
DOT6	YER088C	BIT2	P38346	545 aa		2.61	□□□□□ -1.99
DOT6	YER088C	PHO12	P38693	467 aa		2.61	□□□□□ -1.99
DOT6	YER088C	SFB3	P38810	929 aa		2.61	□□□□□ -1.99
DOT6	YER088C	SDS3	P40505	327 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms