RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W ROD1Q02805 837 aa6.43□□□□□ -1.38
RPT3YDR394W ERV41Q04651 352 aa6.43□□□□□ -1.38
RPT3YDR394W CDC33P07260 213 aaKnown RBP6.42□□□□□ -1.38
RPT3YDR394W SSA1P10591 642 aaKnown RBP6.42□□□□□ -1.38
RPT3YDR394W VMA2P16140 517 aaKnown RBP6.42□□□□□ -1.38
RPT3YDR394W CLB1P24868 471 aa6.42□□□□□ -1.38
RPT3YDR394W NAM7P30771 971 aaKnown RBP6.42□□□□□ -1.38
RPT3YDR394W SEC8P32855 1065 aa6.42□□□□□ -1.38
RPT3YDR394W MCD4P36051 919 aa6.42□□□□□ -1.38
RPT3YDR394W TRZ1P36159 838 aaPredicted RBP6.42□□□□□ -1.38
RPT3YDR394W TVP38P36164 337 aa6.42□□□□□ -1.38
RPT3YDR394W MMS21P38632 267 aa6.42□□□□□ -1.38
RPT3YDR394W HIS2P38635 335 aa6.42□□□□□ -1.38
RPT3YDR394W NPP2P39997 493 aa6.42□□□□□ -1.38
RPT3YDR394W FIR1P40020 876 aa6.42□□□□□ -1.38
RPT3YDR394W SHE10P53075 577 aa6.42□□□□□ -1.38
RPT3YDR394W RRT6P53117 311 aaPredicted RBP6.42□□□□□ -1.38
RPT3YDR394W DIG1Q03063 452 aaKnown RBP6.42□□□□□ -1.38
RPT3YDR394W SVF1Q05515 481 aa6.42□□□□□ -1.38
RPT3YDR394W RSC2Q06488 889 aa6.42□□□□□ -1.38
RPT3YDR394W MCA1Q08601 432 aa6.42□□□□□ -1.38
RPT3YDR394W SPO21Q12411 609 aa6.42□□□□□ -1.38
RPT3YDR394W YLR462WO13556 202 aa6.41□□□□□ -1.38
RPT3YDR394W RPS3P05750 240 aaKnown RBP6.41□□□□□ -1.38
RPT3YDR394W TKL1P23254 680 aaKnown RBP6.41□□□□□ -1.38
RPT3YDR394W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
RPT3YDR394W SHP1P34223 423 aa6.41□□□□□ -1.38
RPT3YDR394W YHL049CP38722 271 aa6.41□□□□□ -1.38
RPT3YDR394W YEL075CP39972 122 aa6.41□□□□□ -1.38
RPT3YDR394W LCP5P40079 357 aaPredicted RBP6.41□□□□□ -1.38
RPT3YDR394W YER189WP40104 122 aa6.41□□□□□ -1.38
RPT3YDR394W YTA12P40341 825 aa6.41□□□□□ -1.38
RPT3YDR394W NTA1P40354 457 aa6.41□□□□□ -1.38
RPT3YDR394W YFL064CP43540 174 aa6.41□□□□□ -1.38
RPT3YDR394W NET1P47035 1189 aa6.41□□□□□ -1.38
RPT3YDR394W VPS53P47061 822 aa6.41□□□□□ -1.38
RPT3YDR394W YGL140CP53120 1219 aa6.41□□□□□ -1.38
RPT3YDR394W YGL039WP53183 348 aaKnown RBP6.41□□□□□ -1.38
RPT3YDR394W BUD9P53226 547 aa6.41□□□□□ -1.38
RPT3YDR394W MDR1P53258 950 aa6.41□□□□□ -1.38
RPT3YDR394W RPA49Q01080 415 aaPredicted RBP6.41□□□□□ -1.38
RPT3YDR394W MTG1Q03151 367 aaPredicted RBP6.41□□□□□ -1.38
RPT3YDR394W ATG16Q03818 150 aa6.41□□□□□ -1.38
RPT3YDR394W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
RPT3YDR394W YOR223WQ12015 292 aa6.41□□□□□ -1.38
RPT3YDR394W AIM41Q12032 185 aa6.41□□□□□ -1.38
RPT3YDR394W YBL111CQ3E7Y5 667 aa6.41□□□□□ -1.38
RPT3YDR394W CDC48P25694 835 aaKnown RBP6.4□□□□□ -1.38
RPT3YDR394W EUG1P32474 517 aa6.4□□□□□ -1.38
RPT3YDR394W TAT1P38085 619 aa6.4□□□□□ -1.38
RPT3YDR394W EXO5P38289 585 aa6.4□□□□□ -1.38
RPT3YDR394W ERC1P38767 581 aa6.4□□□□□ -1.38
RPT3YDR394W AIM46P38885 310 aa6.4□□□□□ -1.38
RPT3YDR394W SAP1P39955 897 aaKnown RBP6.4□□□□□ -1.38
RPT3YDR394W YEL025CP39991 1188 aa6.4□□□□□ -1.38
RPT3YDR394W YNL320WP42840 284 aa6.4□□□□□ -1.38
RPT3YDR394W CTR1P49573 406 aa6.4□□□□□ -1.38
RPT3YDR394W YGR111WP53265 400 aa6.4□□□□□ -1.38
RPT3YDR394W RTT102P53330 157 aa6.4□□□□□ -1.38
RPT3YDR394W TDA9Q04545 1251 aa6.4□□□□□ -1.38
RPT3YDR394W COQ9Q05779 260 aa6.4□□□□□ -1.38
RPT3YDR394W SFH1Q06168 426 aa6.4□□□□□ -1.38
RPT3YDR394W NOC3Q07896 663 aaPredicted RBP6.4□□□□□ -1.38
RPT3YDR394W SLX4Q12098 748 aa6.4□□□□□ -1.38
RPT3YDR394W OSW2Q12202 724 aa6.4□□□□□ -1.38
RPT3YDR394W HIF1Q12373 385 aa6.4□□□□□ -1.38
RPT3YDR394W ERP3Q12403 225 aa6.4□□□□□ -1.38
RPT3YDR394W RPB2P08518 1224 aaKnown RBP6.39□□□□□ -1.39
RPT3YDR394W NAT1P12945 854 aaKnown RBP6.39□□□□□ -1.39
RPT3YDR394W DBF4P32325 704 aa6.39□□□□□ -1.39
RPT3YDR394W SWI3P32591 825 aa6.39□□□□□ -1.39
RPT3YDR394W YME1P32795 747 aa6.39□□□□□ -1.39
RPT3YDR394W TFC4P33339 1025 aa6.39□□□□□ -1.39
RPT3YDR394W PIN4P34217 668 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
RPT3YDR394W SLD2P34252 453 aa6.39□□□□□ -1.39
RPT3YDR394W REG2P38232 338 aa6.39□□□□□ -1.39
RPT3YDR394W AMN1P38285 549 aaPredicted RBP6.39□□□□□ -1.39
RPT3YDR394W RRT2P38332 387 aa6.39□□□□□ -1.39
RPT3YDR394W RAD55P38953 406 aa6.39□□□□□ -1.39
RPT3YDR394W FTR1P40088 404 aa6.39□□□□□ -1.39
RPT3YDR394W TRS85P46944 698 aa6.39□□□□□ -1.39
RPT3YDR394W AVT1P47082 602 aa6.39□□□□□ -1.39
RPT3YDR394W BRO1P48582 844 aa6.39□□□□□ -1.39
RPT3YDR394W RIM8P53179 542 aa6.39□□□□□ -1.39
RPT3YDR394W IES4Q08561 116 aa6.39□□□□□ -1.39
RPT3YDR394W SLP1Q12232 587 aa6.39□□□□□ -1.39
RPT3YDR394W GIS3Q12418 502 aa6.39□□□□□ -1.39
RPT3YDR394W TIF6Q12522 245 aaKnown RBP6.39□□□□□ -1.39
RPT3YDR394W DED1P06634 604 aaKnown RBP6.38□□□□□ -1.39
RPT3YDR394W ADH4P10127 382 aa6.38□□□□□ -1.39
RPT3YDR394W PEP5P12868 1029 aa6.38□□□□□ -1.39
RPT3YDR394W PRP9P19736 530 aaKnown RBP6.38□□□□□ -1.39
RPT3YDR394W RME1P32338 300 aaKnown RBP6.38□□□□□ -1.39
RPT3YDR394W DPH2P32461 534 aa6.38□□□□□ -1.39
RPT3YDR394W CSG2P35206 410 aa6.38□□□□□ -1.39
RPT3YDR394W TIF5P38431 405 aaKnown RBP6.38□□□□□ -1.39
RPT3YDR394W PMC1P38929 1173 aaPredicted RBP6.38□□□□□ -1.39
RPT3YDR394W END3P39013 349 aa6.38□□□□□ -1.39
RPT3YDR394W SAP185P40856 1058 aa6.38□□□□□ -1.39
RPT3YDR394W PHO86P46956 311 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms