RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C DAM1P53267 343 aa2.01□□□□□ -2.09
MSH6YDR097C ARP4P80428 489 aa2.01□□□□□ -2.09
MSH6YDR097C RPT6Q01939 405 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C DPH6Q12429 685 aa2.01□□□□□ -2.09
MSH6YDR097C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
MSH6YDR097C YOL087CQ99247 1116 aa2.01□□□□□ -2.09
MSH6YDR097C MTF2P10849 440 aa2.01□□□□□ -2.09
MSH6YDR097C SRP101P32916 621 aa2.01□□□□□ -2.09
MSH6YDR097C YKR051WP36142 418 aa2.01□□□□□ -2.09
MSH6YDR097C GPT2P36148 743 aa2.01□□□□□ -2.09
MSH6YDR097C KTR3P38130 404 aaPredicted RBP2.01□□□□□ -2.09
MSH6YDR097C MIP6P38760 659 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C UME6P39001 836 aa2.01□□□□□ -2.09
MSH6YDR097C CEM1P39525 442 aa2.01□□□□□ -2.09
MSH6YDR097C SSP120P39931 234 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C SCS2P40075 244 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C SMK1P41808 388 aa2.01□□□□□ -2.09
MSH6YDR097C HDA1P53973 706 aa2.01□□□□□ -2.09
MSH6YDR097C YLR346CQ06139 101 aa2.01□□□□□ -2.09
MSH6YDR097C GAS5Q08193 484 aa2.01□□□□□ -2.09
MSH6YDR097C SSP2Q08646 371 aa2.01□□□□□ -2.09
MSH6YDR097C OSW2Q12202 724 aa2.01□□□□□ -2.09
MSH6YDR097C HSH49Q99181 213 aaPredicted RBP2.01□□□□□ -2.09
MSH6YDR097C YSP2Q06681 1438 aa2.01□□□□□ -2.09
MSH6YDR097C APL1P27351 700 aa2.01□□□□□ -2.09
MSH6YDR097C OAF3P36023 863 aa2.01□□□□□ -2.09
MSH6YDR097C HSL7P38274 827 aa2.01□□□□□ -2.09
MSH6YDR097C CTF8P38877 133 aa2.01□□□□□ -2.09
MSH6YDR097C SKN7P38889 622 aa2.01□□□□□ -2.09
MSH6YDR097C FAF1P40546 346 aaPredicted RBP2.01□□□□□ -2.09
MSH6YDR097C SAP185P40856 1058 aa2.01□□□□□ -2.09
MSH6YDR097C MAD2P40958 196 aa2.01□□□□□ -2.09
MSH6YDR097C SET2P46995 733 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C ASK10P48361 1146 aa2.01□□□□□ -2.09
MSH6YDR097C SCW11P53189 542 aa2.01□□□□□ -2.09
MSH6YDR097C SLU7Q02775 382 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C TSR2Q06672 205 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C STP4Q07351 490 aa2.01□□□□□ -2.09
MSH6YDR097C PUS1Q12211 544 aaKnown RBP2.01□□□□□ -2.09
MSH6YDR097C YLL054CQ12244 843 aa2.01□□□□□ -2.09
MSH6YDR097C CAF20P12962 161 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C SAC7P17121 654 aa2□□□□□ -2.09
MSH6YDR097C PEP3P27801 918 aa2□□□□□ -2.09
MSH6YDR097C CYS3P31373 394 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C DGR2P32330 852 aa2□□□□□ -2.09
MSH6YDR097C YSC84P32793 468 aa2□□□□□ -2.09
MSH6YDR097C AKR1P39010 764 aa2□□□□□ -2.09
MSH6YDR097C RAD26P40352 1085 aa2□□□□□ -2.09
MSH6YDR097C VTC2P43585 828 aa2□□□□□ -2.09
MSH6YDR097C IMA1P53051 589 aa2□□□□□ -2.09
MSH6YDR097C PEF1P53238 335 aa2□□□□□ -2.09
MSH6YDR097C TEP1P53916 434 aa2□□□□□ -2.09
MSH6YDR097C ISA1Q07821 250 aaPredicted RBP2□□□□□ -2.09
MSH6YDR097C YOR059CQ08448 450 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C ELG1Q12050 791 aa2□□□□□ -2.09
MSH6YDR097C SPT7P35177 1332 aa2□□□□□ -2.09
MSH6YDR097C CPA2P03965 1118 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C MFT1P33441 392 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C SHM2P37291 469 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C EMP65P40085 556 aa2□□□□□ -2.09
MSH6YDR097C ESF2P53743 316 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C CDA1Q06702 301 aa2□□□□□ -2.09
MSH6YDR097C STH1P32597 1359 aa2□□□□□ -2.09
MSH6YDR097C NOT3P06102 836 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C RPL19AP0CX82 189 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C RPL19BP0CX83 189 aaPredicted RBP2□□□□□ -2.09
MSH6YDR097C HOM3P10869 527 aa2□□□□□ -2.09
MSH6YDR097C AAC3P18238 307 aa2□□□□□ -2.09
MSH6YDR097C PGS1P25578 521 aa2□□□□□ -2.09
MSH6YDR097C ATG19P35193 415 aa2□□□□□ -2.09
MSH6YDR097C APM3P38153 483 aa2□□□□□ -2.09
MSH6YDR097C PSY4P38193 441 aa2□□□□□ -2.09
MSH6YDR097C YLF2P38746 405 aa2□□□□□ -2.09
MSH6YDR097C RLP7P40693 322 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C BAP3P41815 604 aa2□□□□□ -2.09
MSH6YDR097C RPN11P43588 306 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C SQS1P53866 767 aaKnown RBP2□□□□□ -2.09
MSH6YDR097C OPY2Q06810 360 aa2□□□□□ -2.09
MSH6YDR097C DIN7Q12086 430 aa2□□□□□ -2.09
MSH6YDR097C SWI4P25302 1093 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C CDC60P26637 1090 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C TSA1P34760 196 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C WHI3P34761 661 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C MAE1P36013 669 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C NOP4P37838 685 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C AKL1P38080 1108 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C FAT1P38225 669 aa1.99□□□□□ -2.09
MSH6YDR097C MCX1P38323 520 aaPredicted RBP1.99□□□□□ -2.09
MSH6YDR097C SRP68P38687 599 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C ETP1P38748 585 aaKnown RBP1.99□□□□□ -2.09
MSH6YDR097C DOT5P40553 215 aa1.99□□□□□ -2.09
MSH6YDR097C QRI7P43122 407 aa1.99□□□□□ -2.09
MSH6YDR097C MAD3P47074 515 aa1.99□□□□□ -2.09
MSH6YDR097C GTF1P53260 183 aaPredicted RBP1.99□□□□□ -2.09
MSH6YDR097C YMR210WQ03649 449 aa1.99□□□□□ -2.09
MSH6YDR097C GAD1Q04792 585 aa1.99□□□□□ -2.09
MSH6YDR097C ADY3Q07732 790 aa1.99□□□□□ -2.09
MSH6YDR097C PEX15Q08215 383 aa1.99□□□□□ -2.09
MSH6YDR097C GPB1Q08886 897 aa1.99□□□□□ -2.09
MSH6YDR097C RVB2Q12464 471 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms