RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	HXT7	P39004	570 aa		4.13	□□□□□ -1.75
SLU7	YDR088C	ECM1	P39715	212 aa		4.13	□□□□□ -1.75
SLU7	YDR088C	PAC2	P39937	518 aa		4.13	□□□□□ -1.75
SLU7	YDR088C	SSB2	P40150	613 aa	Known RBP	4.13	□□□□□ -1.75
SLU7	YDR088C	YBP2	P53169	641 aa		4.13	□□□□□ -1.75
SLU7	YDR088C	FHN1	P53279	174 aa		4.13	□□□□□ -1.75
SLU7	YDR088C	CTK1	Q03957	528 aa	Known RBP	4.13	□□□□□ -1.75
SLU7	YDR088C	YTM1	Q12024	460 aa	Predicted RBP	4.13	□□□□□ -1.75
SLU7	YDR088C	ERG6	P25087	383 aa	Known RBP	4.12	□□□□□ -1.75
SLU7	YDR088C	NUP60	P39705	539 aa		4.12	□□□□□ -1.75
SLU7	YDR088C	CCT5	P40413	562 aa	Known RBP	4.12	□□□□□ -1.75
SLU7	YDR088C	GZF3	P42944	551 aa	Known RBP	4.12	□□□□□ -1.75
SLU7	YDR088C	ATG4	P53867	494 aa		4.12	□□□□□ -1.75
SLU7	YDR088C	ARG5,6	Q01217	863 aa		4.12	□□□□□ -1.75
SLU7	YDR088C	SEG1	Q04279	960 aa		4.12	□□□□□ -1.75
SLU7	YDR088C	MLH3	Q12083	715 aa		4.12	□□□□□ -1.75
SLU7	YDR088C	RPS21A	P0C0V8	87 aa	Known RBP	4.11	□□□□□ -1.75
SLU7	YDR088C	IMG2	P25642	146 aa	Predicted RBP	4.11	□□□□□ -1.75
SLU7	YDR088C	EUG1	P32474	517 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	APL2	P36000	726 aa	Predicted RBP	4.11	□□□□□ -1.75
SLU7	YDR088C	AKL1	P38080	1108 aa	Known RBP	4.11	□□□□□ -1.75
SLU7	YDR088C	MAL31	P38156	614 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	APN2	P38207	520 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	YHR202W	P38887	602 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	BEM4	P39011	633 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	YNL195C	P40168	261 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	GID8	P40208	455 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	MNN11	P46985	422 aa	Known RBP	4.11	□□□□□ -1.75
SLU7	YDR088C	SET2	P46995	733 aa	Known RBP	4.11	□□□□□ -1.75
SLU7	YDR088C	SCS3	P53012	380 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	IOC4	Q04213	475 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	MCM21	Q06675	368 aa		4.11	□□□□□ -1.75
SLU7	YDR088C	HRP1	Q99383	534 aa	Known RBP	4.11	□□□□□ -1.75
SLU7	YDR088C	OAF3	P36023	863 aa		4.1	□□□□□ -1.75
SLU7	YDR088C	FAT1	P38225	669 aa		4.1	□□□□□ -1.75
SLU7	YDR088C	ENP1	P38333	483 aa	Known RBP	4.1	□□□□□ -1.75
SLU7	YDR088C	HMO1	Q03973	246 aa	Known RBP	4.1	□□□□□ -1.75
SLU7	YDR088C	YHM2	Q04013	314 aa		4.1	□□□□□ -1.75
SLU7	YDR088C	USV1	Q12132	391 aa		4.1	□□□□□ -1.75
SLU7	YDR088C	SWI6	P09959	803 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	ERG11	P10614	530 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	THR1	P17423	357 aa	Known RBP	4.09	□□□□□ -1.75
SLU7	YDR088C	RNR1	P21524	888 aa	Known RBP	4.09	□□□□□ -1.75
SLU7	YDR088C	SER1	P33330	395 aa	Known RBP	4.09	□□□□□ -1.75
SLU7	YDR088C	MUP3	P38734	546 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	GET2	P40056	285 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	BNA3	P47039	444 aa	Known RBP	4.09	□□□□□ -1.75
SLU7	YDR088C	COX18	P53239	316 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	COG6	P53959	839 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	YLR407W	Q06070	228 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	YPS7	Q06325	596 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	ISA1	Q07821	250 aa	Predicted RBP	4.09	□□□□□ -1.75
SLU7	YDR088C	HFI1	Q12060	488 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	ECM3	Q99252	613 aa		4.09	□□□□□ -1.75
SLU7	YDR088C	SEC65	P29478	273 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	YKU70	P32807	602 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	YKR075C	P36155	307 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	YBR071W	P38243	211 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	PAF1	P38351	445 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	MRK1	P50873	501 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	FOL1	P53848	824 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	GPD1	Q00055	391 aa	Known RBP	4.08	□□□□□ -1.76
SLU7	YDR088C	RCR2	Q03446	210 aa	Known RBP	4.08	□□□□□ -1.76
SLU7	YDR088C	VPS36	Q06696	566 aa		4.08	□□□□□ -1.76
SLU7	YDR088C	GLN4	P13188	809 aa	Known RBP	4.07	□□□□□ -1.76
SLU7	YDR088C	SET3	P36124	751 aa		4.07	□□□□□ -1.76
SLU7	YDR088C	TRZ1	P36159	838 aa	Predicted RBP	4.07	□□□□□ -1.76
SLU7	YDR088C	APT2	P36973	181 aa		4.07	□□□□□ -1.76
SLU7	YDR088C	GPP2	P40106	250 aa	Known RBP	4.07	□□□□□ -1.76
SLU7	YDR088C	NIT2	P47016	307 aa		4.07	□□□□□ -1.76
SLU7	YDR088C	NOP9	P47077	666 aa	Known RBP	4.07	□□□□□ -1.76
SLU7	YDR088C	NOP15	P53927	220 aa	Predicted RBP	4.07	□□□□□ -1.76
SLU7	YDR088C	TRE2	Q08693	809 aa		4.07	□□□□□ -1.76
SLU7	YDR088C	APM4	Q99186	491 aa		4.07	□□□□□ -1.76
SLU7	YDR088C	PTP1	P25044	335 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	FUB1	P25659	250 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	TFC4	P33339	1025 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	DID4	P36108	232 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	DUG1	P43616	481 aa	Known RBP	4.06	□□□□□ -1.76
SLU7	YDR088C	BFA1	P47113	574 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	REC102	Q02721	264 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	YMR210W	Q03649	449 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	RGT2	Q12300	763 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	ZRT2	Q12436	422 aa		4.06	□□□□□ -1.76
SLU7	YDR088C	RPS17A	P02407	136 aa	Known RBP	4.05	□□□□□ -1.76
SLU7	YDR088C	RPS17B	P14127	136 aa	Known RBP	4.05	□□□□□ -1.76
SLU7	YDR088C	IME1	P21190	360 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	MRC1	P25588	1096 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	TOM20	P35180	183 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	XBP1	P40489	647 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	VID28	P40547	921 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	RSC8	P43609	557 aa	Known RBP	4.05	□□□□□ -1.76
SLU7	YDR088C	NET1	P47035	1189 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	PTA1	Q01329	785 aa	Predicted RBP	4.05	□□□□□ -1.76
SLU7	YDR088C	STP4	Q07351	490 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	VHS3	Q08438	674 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	SLK19	Q08581	821 aa	Known RBP	4.05	□□□□□ -1.76
SLU7	YDR088C	YPR027C	Q12079	277 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	RMP1	Q12530	201 aa		4.05	□□□□□ -1.76
SLU7	YDR088C	STE12	P13574	688 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms