RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W EUG1P32474 517 aa3.1□□□□□ -1.91
VPS41YDR080W TIF4631P39935 952 aaKnown RBP3.1□□□□□ -1.91
VPS41YDR080W CEP3P40969 608 aa3.1□□□□□ -1.91
VPS41YDR080W PSP2P50109 593 aaKnown RBP3.1□□□□□ -1.91
VPS41YDR080W YGR283CP53336 341 aaPredicted RBP3.1□□□□□ -1.91
VPS41YDR080W LRS4Q04087 347 aaKnown RBP3.1□□□□□ -1.91
VPS41YDR080W SPO75Q07798 868 aa3.1□□□□□ -1.91
VPS41YDR080W PIF1P07271 859 aa3.09□□□□□ -1.91
VPS41YDR080W DAL5P15365 543 aa3.09□□□□□ -1.91
VPS41YDR080W POL3P15436 1097 aa3.09□□□□□ -1.91
VPS41YDR080W HSP60P19882 572 aaKnown RBP3.09□□□□□ -1.91
VPS41YDR080W BUD6P41697 788 aa3.09□□□□□ -1.91
VPS41YDR080W SNU66Q12420 587 aaPredicted RBP3.09□□□□□ -1.91
VPS41YDR080W CYB2P00175 591 aa3.09□□□□□ -1.91
VPS41YDR080W TYE7P33122 291 aaPredicted RBP3.09□□□□□ -1.91
VPS41YDR080W YIL108WP40483 696 aaKnown RBP3.09□□□□□ -1.91
VPS41YDR080W GSF2Q04697 403 aaKnown RBP3.09□□□□□ -1.91
VPS41YDR080W TRP4P07285 380 aaPredicted RBP3.09□□□□□ -1.92
VPS41YDR080W ERR1P0CX10 437 aa3.09□□□□□ -1.92
VPS41YDR080W ERR2P0CX11 437 aa3.09□□□□□ -1.92
VPS41YDR080W PES4P39684 611 aa3.09□□□□□ -1.92
VPS41YDR080W FUN12P39730 1002 aaKnown RBP3.09□□□□□ -1.92
VPS41YDR080W AFG3P39925 761 aa3.09□□□□□ -1.92
VPS41YDR080W LAM4P38800 1345 aa3.08□□□□□ -1.92
VPS41YDR080W HRR25P29295 494 aaKnown RBP3.08□□□□□ -1.92
VPS41YDR080W BCS1P32839 456 aa3.08□□□□□ -1.92
VPS41YDR080W NUP133P36161 1157 aa3.08□□□□□ -1.92
VPS41YDR080W YJL049WP47048 450 aa3.08□□□□□ -1.92
VPS41YDR080W SED4P25365 1065 aa3.08□□□□□ -1.92
VPS41YDR080W CTF13P35203 478 aa3.08□□□□□ -1.92
VPS41YDR080W CST26P38226 397 aa3.08□□□□□ -1.92
VPS41YDR080W UBP12P39538 1254 aa3.08□□□□□ -1.92
VPS41YDR080W YBL028CP38202 106 aa3.07□□□□□ -1.92
VPS41YDR080W TOM71P38825 639 aaKnown RBP3.07□□□□□ -1.92
VPS41YDR080W TAD1P53065 400 aa3.07□□□□□ -1.92
VPS41YDR080W ASM4Q05166 528 aa3.07□□□□□ -1.92
VPS41YDR080W THI21Q08975 551 aa3.07□□□□□ -1.92
VPS41YDR080W PNS1Q12412 539 aa3.07□□□□□ -1.92
VPS41YDR080W VMA2P16140 517 aaKnown RBP3.07□□□□□ -1.92
VPS41YDR080W CDC11P32458 415 aa3.07□□□□□ -1.92
VPS41YDR080W THI22Q06490 572 aa3.07□□□□□ -1.92
VPS41YDR080W YBR182C-AQ8TGU6 64 aa3.07□□□□□ -1.92
VPS41YDR080W MPH2P0CD99 609 aa3.06□□□□□ -1.92
VPS41YDR080W EFT1P32324 842 aaKnown RBP3.06□□□□□ -1.92
VPS41YDR080W EMC3P36039 253 aa3.06□□□□□ -1.92
VPS41YDR080W GGA2P38817 585 aaKnown RBP3.06□□□□□ -1.92
VPS41YDR080W JHD1P40034 492 aa3.06□□□□□ -1.92
VPS41YDR080W OSH2Q12451 1283 aa3.06□□□□□ -1.92
VPS41YDR080W DAL7P21826 554 aa3.06□□□□□ -1.92
VPS41YDR080W SPC29P33419 253 aa3.06□□□□□ -1.92
VPS41YDR080W SOL4P53315 255 aa3.06□□□□□ -1.92
VPS41YDR080W BRE5P53741 515 aaKnown RBP3.06□□□□□ -1.92
VPS41YDR080W HEF3P53978 1044 aaKnown RBP3.06□□□□□ -1.92
VPS41YDR080W RPN4Q03465 531 aa3.06□□□□□ -1.92
VPS41YDR080W ECM16Q04217 1267 aaKnown RBP3.06□□□□□ -1.92
VPS41YDR080W YOL073CQ08232 322 aa3.06□□□□□ -1.92
VPS41YDR080W MOT1P32333 1867 aa3.06□□□□□ -1.92
VPS41YDR080W SYN8P31377 255 aa3.06□□□□□ -1.92
VPS41YDR080W PTK1P36002 662 aaPredicted RBP3.06□□□□□ -1.92
VPS41YDR080W PIP2P52960 996 aa3.06□□□□□ -1.92
VPS41YDR080W MUS81Q04149 632 aaPredicted RBP3.06□□□□□ -1.92
VPS41YDR080W YOR022CQ12204 715 aa3.06□□□□□ -1.92
VPS41YDR080W CYS3P31373 394 aaKnown RBP3.05□□□□□ -1.92
VPS41YDR080W VHR1P40522 640 aa3.05□□□□□ -1.92
VPS41YDR080W ART5P53244 586 aaKnown RBP3.05□□□□□ -1.92
VPS41YDR080W YDR338CQ05497 695 aa3.05□□□□□ -1.92
VPS41YDR080W PEX19Q07418 342 aa3.05□□□□□ -1.92
VPS41YDR080W RTT109Q07794 436 aa3.05□□□□□ -1.92
VPS41YDR080W YOL098CQ12496 1037 aa3.05□□□□□ -1.92
VPS41YDR080W SNA3P14359 133 aa3.05□□□□□ -1.92
VPS41YDR080W RFA1P22336 621 aaKnown RBP3.05□□□□□ -1.92
VPS41YDR080W MIH1P23748 554 aa3.05□□□□□ -1.92
VPS41YDR080W MOH1P38191 138 aa3.05□□□□□ -1.92
VPS41YDR080W YHR078WP38799 552 aa3.05□□□□□ -1.92
VPS41YDR080W TPO2P53283 614 aa3.05□□□□□ -1.92
VPS41YDR080W ASI2P53895 289 aa3.05□□□□□ -1.92
VPS41YDR080W ATP25Q03153 612 aa3.05□□□□□ -1.92
VPS41YDR080W CDC53Q12018 815 aaKnown RBP3.05□□□□□ -1.92
VPS41YDR080W YDR524C-BQ3E6R4 66 aa3.05□□□□□ -1.92
VPS41YDR080W RPP2AP05319 106 aaKnown RBP3.04□□□□□ -1.92
VPS41YDR080W CAD1P24813 409 aaKnown RBP3.04□□□□□ -1.92
VPS41YDR080W ERG4P25340 473 aa3.04□□□□□ -1.92
VPS41YDR080W YBR053CP38235 358 aa3.04□□□□□ -1.92
VPS41YDR080W ALG2P43636 503 aa3.04□□□□□ -1.92
VPS41YDR080W SKY1Q03656 742 aa3.04□□□□□ -1.92
VPS41YDR080W YML037CQ03703 340 aa3.04□□□□□ -1.92
VPS41YDR080W SKG3Q06315 1026 aa3.04□□□□□ -1.92
VPS41YDR080W YDL124WQ07551 312 aaKnown RBP3.04□□□□□ -1.92
VPS41YDR080W RPP1P38786 293 aa3.04□□□□□ -1.92
VPS41YDR080W NOC2P39744 710 aaKnown RBP3.04□□□□□ -1.92
VPS41YDR080W HUL4P40985 892 aa3.04□□□□□ -1.92
VPS41YDR080W MUK1Q02866 612 aa3.04□□□□□ -1.92
VPS41YDR080W STI1P15705 589 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
VPS41YDR080W PBP2P38151 413 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
VPS41YDR080W RGC1Q06108 1083 aaKnown RBP3.03□□□□□ -1.92
VPS41YDR080W RIF1P29539 1916 aa3.03□□□□□ -1.92
VPS41YDR080W TOM70P07213 617 aaKnown RBP3.03□□□□□ -1.92
VPS41YDR080W MEF1P25039 761 aa3.03□□□□□ -1.92
VPS41YDR080W GDH3P39708 457 aa3.03□□□□□ -1.92
VPS41YDR080W INM2Q05533 292 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms