RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	FRD1	P32614	470 aa	Known RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	YKR018C	P36114	725 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	PSY4	P38193	441 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	RFC1	P38630	861 aa	Known RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	EAF5	P39995	279 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	STU2	P46675	888 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	RBG2	P53295	368 aa	Known RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	NCS2	P53923	493 aa	Predicted RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	SEC5	P89102	971 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	DIN7	Q12086	430 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	ARP7	Q12406	477 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
SOK1	YDR006C	NFS1	P25374	497 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	CMK1	P27466	446 aa	Known RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	HXT4	P32467	576 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	RIB7	P33312	244 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	NIP100	P33420	868 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	OAF3	P36023	863 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	YRO2	P38079	344 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	ALG14	P38242	237 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	TDA3	P38758	523 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	CEM1	P39525	442 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	YEL057C	P39983	233 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	YIL161W	P40449	235 aa	Known RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	ALT1	P52893	592 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	DSD1	P53095	428 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	DOT1	Q04089	582 aa	Known RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	YLR287C	Q05881	355 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	DBP9	Q06218	594 aa	Known RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	YPR172W	Q06608	200 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	OMS1	Q06668	471 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	MDM38	Q08179	573 aa		3.12	□□□□□ -1.91
SOK1	YDR006C	HSH49	Q99181	213 aa	Predicted RBP	3.12	□□□□□ -1.91
SOK1	YDR006C	MET17	P06106	444 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	ADH4	P10127	382 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	COX11	P19516	300 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	CDC48	P25694	835 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	PRP19	P32523	503 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	SFA1	P32771	386 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	DOM34	P33309	386 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	CNS1	P33313	385 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	UIP5	P36137	443 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	SIF2	P38262	535 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	JJJ3	P47138	172 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	BIO3	P50277	480 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	YGR266W	P53326	701 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	SNF12	P53628	566 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	VTC3	Q02725	835 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	YPL107W	Q02873	248 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	ERO1	Q03103	563 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	YMR155W	Q03795	547 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	GPR1	Q12361	961 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	PCD1	Q12524	340 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	VMA2	P16140	517 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
SOK1	YDR006C	ADE2	P21264	571 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	MSH1	P25846	959 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	YJU2	P28320	278 aa	Predicted RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	TRK2	P28584	889 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	PRO1	P32264	428 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	YKL100C	P34248	587 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	YKL133C	P36066	463 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	CTM1	P38818	585 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	YHR202W	P38887	602 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	PSD1	P39006	500 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	PIK1	P39104	1066 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	AGX1	P43567	385 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	POL31	P46957	487 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	ATP22	P50273	684 aa	Predicted RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	MRPL19	P53875	158 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	TEP1	P53916	434 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	LEE1	Q02799	301 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	ATP25	Q03153	612 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	RBA50	Q04418	439 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	GSF2	Q04697	403 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	PHO92	Q06390	306 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	SWA2	Q06677	668 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	PML1	Q07930	204 aa	Predicted RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	MET7	Q08645	548 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	TGL5	Q12043	749 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	PUS1	Q12211	544 aa	Known RBP	3.11	□□□□□ -1.91
SOK1	YDR006C	SLP1	Q12232	587 aa		3.11	□□□□□ -1.91
SOK1	YDR006C	ADK2	P26364	225 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	YSC84	P32793	468 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	PTH2	P34222	208 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	UBS1	P38290	277 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	YJL068C	P40363	299 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	YFL066C	P43538	392 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	UBC9	P50623	157 aa	Predicted RBP	3.1	□□□□□ -1.91
SOK1	YDR006C	SGF73	P53165	657 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	SRT1	Q03175	343 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	NGL3	Q03210	505 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	HPF1	Q05164	967 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	MMR1	Q06324	491 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	YPL260W	Q08977	551 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	ACM1	Q08981	209 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	LAP2	Q10740	671 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	Q0142	Q9ZZW4	58 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	MRP7	P12687	371 aa		3.1	□□□□□ -1.91
SOK1	YDR006C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms