RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W PIN4P34217 668 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
NUP84YDL116W SHP1P34223 423 aa7.29□□□□□ -1.24
NUP84YDL116W YML6P51998 286 aa7.29□□□□□ -1.24
NUP84YDL116W NOC3Q07896 663 aaPredicted RBP7.29□□□□□ -1.24
NUP84YDL116W RUP1Q12242 671 aa7.29□□□□□ -1.24
NUP84YDL116W YDR461C-AQ2V2P7 80 aa7.29□□□□□ -1.24
NUP84YDL116W SEM1O94742 89 aa7.29□□□□□ -1.24
NUP84YDL116W PHO8P11491 566 aa7.29□□□□□ -1.24
NUP84YDL116W GAP1P19145 602 aaPredicted RBP7.29□□□□□ -1.24
NUP84YDL116W SIT4P20604 311 aa7.29□□□□□ -1.24
NUP84YDL116W URE2P23202 354 aaKnown RBP7.29□□□□□ -1.24
NUP84YDL116W RRT12P25381 491 aa7.29□□□□□ -1.24
NUP84YDL116W SRO9P25567 434 aaKnown RBP7.29□□□□□ -1.24
NUP84YDL116W TOA1P32773 286 aa7.29□□□□□ -1.24
NUP84YDL116W HES1P35843 434 aa7.29□□□□□ -1.24
NUP84YDL116W POP4P38336 279 aa7.29□□□□□ -1.24
NUP84YDL116W MMS21P38632 267 aa7.29□□□□□ -1.24
NUP84YDL116W HOS4P40480 1083 aa7.29□□□□□ -1.24
NUP84YDL116W CPR7P47103 393 aa7.29□□□□□ -1.24
NUP84YDL116W HSH155P49955 971 aaKnown RBP7.29□□□□□ -1.24
NUP84YDL116W TAM41P53230 385 aa7.29□□□□□ -1.24
NUP84YDL116W UTP22P53254 1237 aaPredicted RBP7.29□□□□□ -1.24
NUP84YDL116W YMR027WQ04371 470 aa7.29□□□□□ -1.24
NUP84YDL116W FUS2Q05670 677 aa7.29□□□□□ -1.24
NUP84YDL116W HSF1P10961 833 aa7.28□□□□□ -1.24
NUP84YDL116W GAL2P13181 574 aa7.28□□□□□ -1.24
NUP84YDL116W DBP5P20449 482 aaKnown RBP7.28□□□□□ -1.24
NUP84YDL116W TFC3P34111 1160 aa7.28□□□□□ -1.24
NUP84YDL116W PDX3P38075 228 aaKnown RBP7.28□□□□□ -1.24
NUP84YDL116W CST26P38226 397 aa7.28□□□□□ -1.24
NUP84YDL116W ALG5P40350 334 aa7.28□□□□□ -1.24
NUP84YDL116W AIM21P40563 679 aa7.28□□□□□ -1.24
NUP84YDL116W GPD2P41911 440 aaKnown RBP7.28□□□□□ -1.24
NUP84YDL116W TAN1P53072 289 aaPredicted RBP7.28□□□□□ -1.24
NUP84YDL116W NOP15P53927 220 aaPredicted RBP7.28□□□□□ -1.24
NUP84YDL116W YET3Q07451 203 aa7.28□□□□□ -1.24
NUP84YDL116W CRD1Q07560 283 aa7.28□□□□□ -1.24
NUP84YDL116W MSS116P15424 664 aaKnown RBP7.27□□□□□ -1.24
NUP84YDL116W EUG1P32474 517 aa7.27□□□□□ -1.24
NUP84YDL116W NPL6P32832 435 aa7.27□□□□□ -1.24
NUP84YDL116W SEG2P34250 1132 aa7.27□□□□□ -1.24
NUP84YDL116W TMN3P40071 706 aa7.27□□□□□ -1.24
NUP84YDL116W AIM20P40451 204 aa7.27□□□□□ -1.24
NUP84YDL116W DPH1P40487 425 aaKnown RBP7.27□□□□□ -1.24
NUP84YDL116W VTC4P47075 721 aa7.27□□□□□ -1.24
NUP84YDL116W INP52P50942 1183 aa7.27□□□□□ -1.24
NUP84YDL116W ELP3Q02908 557 aaKnown RBP7.27□□□□□ -1.24
NUP84YDL116W CWC15Q03772 175 aaKnown RBP7.27□□□□□ -1.24
NUP84YDL116W YPR109WQ06104 294 aa7.27□□□□□ -1.24
NUP84YDL116W MEU1Q07938 337 aaKnown RBP RIP-Chip data7.27□□□□□ -1.24not detected
NUP84YDL116W PMA1P05030 918 aaKnown RBP7.27□□□□□ -1.25
NUP84YDL116W RNR1P21524 888 aaKnown RBP7.27□□□□□ -1.25
NUP84YDL116W MRPL25P23369 157 aa7.27□□□□□ -1.25
NUP84YDL116W TRM2P33753 639 aa7.27□□□□□ -1.25
NUP84YDL116W YKR078WP36158 585 aaKnown RBP7.27□□□□□ -1.25
NUP84YDL116W SPC97P38863 823 aa7.27□□□□□ -1.25
NUP84YDL116W YJL206CP39529 758 aa7.27□□□□□ -1.25
NUP84YDL116W SPC72P39723 622 aa7.27□□□□□ -1.25
NUP84YDL116W SAW1P39735 261 aa7.27□□□□□ -1.25
NUP84YDL116W SBE2P42223 864 aaKnown RBP7.27□□□□□ -1.25
NUP84YDL116W ASG7P46993 209 aa7.27□□□□□ -1.25
NUP84YDL116W TAF6P53040 516 aa7.27□□□□□ -1.25
NUP84YDL116W NMA111P53920 997 aa7.27□□□□□ -1.25
NUP84YDL116W PSF3Q12146 194 aa7.27□□□□□ -1.25
NUP84YDL116W PCK1P10963 549 aa7.26□□□□□ -1.25
NUP84YDL116W PRP22P24384 1145 aaKnown RBP7.26□□□□□ -1.25
NUP84YDL116W CDC20P26309 610 aa7.26□□□□□ -1.25
NUP84YDL116W RAD14P28519 371 aa7.26□□□□□ -1.25
NUP84YDL116W AST1P35183 429 aa7.26□□□□□ -1.25
NUP84YDL116W KES1P35844 434 aaKnown RBP7.26□□□□□ -1.25
NUP84YDL116W COS5P47187 383 aa7.26□□□□□ -1.25
NUP84YDL116W CNM67P53865 581 aaKnown RBP7.26□□□□□ -1.25
NUP84YDL116W INA17Q02888 182 aa7.26□□□□□ -1.25
NUP84YDL116W ADE13Q05911 482 aaKnown RBP7.26□□□□□ -1.25
NUP84YDL116W YSH1Q06224 779 aaPredicted RBP7.26□□□□□ -1.25
NUP84YDL116W APC9Q12107 265 aa7.26□□□□□ -1.25
NUP84YDL116W RRG1Q12167 365 aaPredicted RBP7.26□□□□□ -1.25
NUP84YDL116W YML002WP0CF17 737 aa7.26□□□□□ -1.25
NUP84YDL116W HXT3P32466 567 aaKnown RBP7.26□□□□□ -1.25
NUP84YDL116W NUF2P33895 451 aa7.26□□□□□ -1.25
NUP84YDL116W APM2P38700 605 aa7.26□□□□□ -1.25
NUP84YDL116W PIK1P39104 1066 aa7.26□□□□□ -1.25
NUP84YDL116W PDS1P40316 373 aaPredicted RBP7.26□□□□□ -1.25
NUP84YDL116W CHS6P40955 746 aa7.26□□□□□ -1.25
NUP84YDL116W ALD6P54115 500 aaKnown RBP7.26□□□□□ -1.25
NUP84YDL116W ATG16Q03818 150 aa7.26□□□□□ -1.25
NUP84YDL116W TDA5Q06417 326 aaKnown RBP7.26□□□□□ -1.25
NUP84YDL116W VHS3Q08438 674 aa7.26□□□□□ -1.25
NUP84YDL116W YPR202WQ08993 238 aa7.26□□□□□ -1.25
NUP84YDL116W SNF1P06782 633 aaKnown RBP7.25□□□□□ -1.25
NUP84YDL116W SUV3P32580 737 aa7.25□□□□□ -1.25
NUP84YDL116W MRE11P32829 692 aa7.25□□□□□ -1.25
NUP84YDL116W PPG1P32838 368 aa7.25□□□□□ -1.25
NUP84YDL116W PGM1P33401 570 aaKnown RBP7.25□□□□□ -1.25
NUP84YDL116W NUP120P35729 1037 aa7.25□□□□□ -1.25
NUP84YDL116W RRP14P36080 434 aaKnown RBP7.25□□□□□ -1.25
NUP84YDL116W ETR1P38071 380 aa7.25□□□□□ -1.25
NUP84YDL116W SLM4P38247 162 aa7.25□□□□□ -1.25
NUP84YDL116W KEL1P38853 1164 aaKnown RBP7.25□□□□□ -1.25
NUP84YDL116W MPH1P40562 993 aa7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms