RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C MPS2P53159 387 aa1.14□□□□□ -2.23
VAM6YDL077C CGR1P53188 120 aa1.14□□□□□ -2.23
VAM6YDL077C BUD9P53226 547 aa1.14□□□□□ -2.23
VAM6YDL077C COS6P53344 381 aa1.14□□□□□ -2.23
VAM6YDL077C YTP1P53584 459 aa1.14□□□□□ -2.23
VAM6YDL077C CWC25P53854 179 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C BOP3P53958 396 aa1.14□□□□□ -2.23
VAM6YDL077C RCM1P53972 490 aa1.14□□□□□ -2.23
VAM6YDL077C RSM24Q03976 319 aa1.14□□□□□ -2.23
VAM6YDL077C URC2Q04411 772 aa1.14□□□□□ -2.23
VAM6YDL077C RBA50Q04418 439 aa1.14□□□□□ -2.23
VAM6YDL077C BCH1Q05029 724 aa1.14□□□□□ -2.23
VAM6YDL077C CRN1Q06440 651 aa1.14□□□□□ -2.23
VAM6YDL077C ATG23Q06671 453 aa1.14□□□□□ -2.23
VAM6YDL077C VAC14Q06708 880 aa1.14□□□□□ -2.23
VAM6YDL077C GPI13Q07830 1017 aa1.14□□□□□ -2.23
VAM6YDL077C NBA1Q08229 501 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C ACF2Q12168 779 aa1.14□□□□□ -2.23
VAM6YDL077C APM4Q99186 491 aa1.14□□□□□ -2.23
VAM6YDL077C YIL177CP40434 1758 aa1.13□□□□□ -2.23
VAM6YDL077C YJL225CP40889 1758 aa1.13□□□□□ -2.23
VAM6YDL077C STF1P01098 86 aa1.13□□□□□ -2.23
VAM6YDL077C CMD1P06787 147 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C SWI5P08153 709 aa1.13□□□□□ -2.23
VAM6YDL077C WHI2P12611 486 aa1.13□□□□□ -2.23
VAM6YDL077C PMS1P14242 873 aa1.13□□□□□ -2.23
VAM6YDL077C SEC63P14906 663 aa1.13□□□□□ -2.23
VAM6YDL077C DAP2P18962 818 aa1.13□□□□□ -2.23
VAM6YDL077C PMA2P19657 947 aa1.13□□□□□ -2.23
VAM6YDL077C CBP3P21560 335 aa1.13□□□□□ -2.23
VAM6YDL077C KIN3P22209 435 aa1.13□□□□□ -2.23
VAM6YDL077C VPS3P23643 1011 aa1.13□□□□□ -2.23
VAM6YDL077C RSC6P25632 483 aa1.13□□□□□ -2.23
VAM6YDL077C ICL1P28240 557 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C KIP1P28742 1111 aa1.13□□□□□ -2.23
VAM6YDL077C ZIP1P31111 875 aa1.13□□□□□ -2.23
VAM6YDL077C RME1P32338 300 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C UBC6P33296 250 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C PEX5P35056 612 aa1.13□□□□□ -2.23
VAM6YDL077C KAE1P36132 386 aa1.13□□□□□ -2.23
VAM6YDL077C ECM4P36156 370 aa1.13□□□□□ -2.23
VAM6YDL077C AKL1P38080 1108 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C DUG2P38149 878 aa1.13□□□□□ -2.23
VAM6YDL077C BCD1P38772 366 aa1.13□□□□□ -2.23
VAM6YDL077C KEL1P38853 1164 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C AIM9P40053 627 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C SCS2P40075 244 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C DSE1P40077 573 aa1.13□□□□□ -2.23
VAM6YDL077C RTR1P40084 226 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C UTP25P40498 721 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C MKT1P40850 830 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C APT1P49435 187 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C PRP31P49704 494 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C YGR237CP50089 785 aa1.13□□□□□ -2.23
VAM6YDL077C UBA2P52488 636 aa1.13□□□□□ -2.23
VAM6YDL077C ZIP2P53061 704 aa1.13□□□□□ -2.23
VAM6YDL077C YGR125WP53273 1036 aa1.13□□□□□ -2.23
VAM6YDL077C RET3P53600 189 aa1.13□□□□□ -2.23
VAM6YDL077C ADE16P54113 591 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C EGD1Q02642 157 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C TFB2Q02939 513 aa1.13□□□□□ -2.23
VAM6YDL077C MSH6Q03834 1242 aa1.13□□□□□ -2.23
VAM6YDL077C SXM1Q04175 944 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C VPS20Q04272 221 aa1.13□□□□□ -2.23
VAM6YDL077C VTI1Q04338 217 aa1.13□□□□□ -2.23
VAM6YDL077C YMR018WQ04364 514 aa1.13□□□□□ -2.23
VAM6YDL077C GAL83Q04739 417 aa1.13□□□□□ -2.23
VAM6YDL077C ATG38Q05789 226 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C ADE13Q05911 482 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C RGC1Q06108 1083 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C NKP2Q06162 153 aa1.13□□□□□ -2.23
VAM6YDL077C YLR177WQ06251 628 aa1.13□□□□□ -2.23
VAM6YDL077C TFC6Q06339 672 aa1.13□□□□□ -2.23
VAM6YDL077C TDA5Q06417 326 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C UTP4Q06679 776 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C BDF2Q07442 638 aa1.13□□□□□ -2.23
VAM6YDL077C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
VAM6YDL077C DAS2Q12084 232 aa1.13□□□□□ -2.23
VAM6YDL077C GNT1Q12096 491 aa1.13□□□□□ -2.23
VAM6YDL077C YPR063CQ12160 140 aa1.13□□□□□ -2.23
VAM6YDL077C LDB17Q12342 491 aa1.13□□□□□ -2.23
VAM6YDL077C ARP6Q12509 438 aa1.13□□□□□ -2.23
VAM6YDL077C SET6Q12529 373 aa1.13□□□□□ -2.23
VAM6YDL077C ADF1Q2V2Q1 113 aa1.13□□□□□ -2.23
VAM6YDL077C LAG2Q92325 660 aa1.13□□□□□ -2.23
VAM6YDL077C RIM15P43565 1770 aa1.13□□□□□ -2.23
VAM6YDL077C CYB2P00175 591 aa1.13□□□□□ -2.23
VAM6YDL077C PIF1P07271 859 aa1.13□□□□□ -2.23
VAM6YDL077C RPS6AP0CX37 236 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C RPS6BP0CX38 236 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C PET54P10834 293 aa1.13□□□□□ -2.23
VAM6YDL077C RSR1P13856 272 aa1.13□□□□□ -2.23
VAM6YDL077C RAD4P14736 754 aa1.13□□□□□ -2.23
VAM6YDL077C SPE2P21182 396 aa1.13□□□□□ -2.23
VAM6YDL077C CMK2P22517 447 aa1.13□□□□□ -2.23
VAM6YDL077C SPO11P23179 398 aa1.13□□□□□ -2.23
VAM6YDL077C CNA1P23287 553 aa1.13□□□□□ -2.23
VAM6YDL077C YDJ1P25491 409 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C BMH1P29311 267 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C SEC21P32074 935 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 127.7 ms