RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W CBP2P03874 630 aaPredicted RBP2.12□□□□□ -2.07
USO1YDL058W RPS9BP05755 195 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W GPH1P06738 902 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W RHO2P06781 192 aa2.12□□□□□ -2.07
USO1YDL058W HTS1P07263 546 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W SUI3P09064 285 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W YKL091CP33324 310 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W IRS4P36115 615 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W BOI1P38041 980 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W RCK2P38623 610 aa2.12□□□□□ -2.07
USO1YDL058W ATG32P40458 529 aa2.12□□□□□ -2.07
USO1YDL058W SNF12P53628 566 aa2.12□□□□□ -2.07
USO1YDL058W PDR16P53860 351 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W SQS1P53866 767 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W SYF1Q04048 859 aaPredicted RBP2.12□□□□□ -2.07
USO1YDL058W BDS1Q08347 646 aa2.12□□□□□ -2.07
USO1YDL058W ATG9Q12142 997 aa2.12□□□□□ -2.07
USO1YDL058W RPA190P10964 1664 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W HOM2P13663 365 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W NMT1P14743 455 aa2.12□□□□□ -2.07
USO1YDL058W CKA1P15790 372 aa2.12□□□□□ -2.07
USO1YDL058W DPB2P24482 689 aaPredicted RBP2.12□□□□□ -2.07
USO1YDL058W PGS1P25578 521 aa2.12□□□□□ -2.07
USO1YDL058W ATP7P30902 174 aa2.12□□□□□ -2.07
USO1YDL058W ATP11P32453 318 aa2.12□□□□□ -2.07
USO1YDL058W SSE2P32590 693 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W PRP40P33203 583 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W HEL1P36113 551 aa2.12□□□□□ -2.07
USO1YDL058W RIM11P38615 370 aa2.12□□□□□ -2.07
USO1YDL058W YHL050CP38721 697 aa2.12□□□□□ -2.07
USO1YDL058W SHC1P39000 512 aa2.12□□□□□ -2.07
USO1YDL058W BEM4P39011 633 aa2.12□□□□□ -2.07
USO1YDL058W MET18P40469 1032 aa2.12□□□□□ -2.07
USO1YDL058W CIR1P42940 261 aa2.12□□□□□ -2.07
USO1YDL058W OTU1P43558 301 aa2.12□□□□□ -2.07
USO1YDL058W NOP13P53883 403 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
USO1YDL058W TRM44Q02648 567 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W CTF19Q02732 369 aa2.12□□□□□ -2.07
USO1YDL058W YDR541CQ03049 344 aa2.12□□□□□ -2.07
USO1YDL058W FUS2Q05670 677 aa2.12□□□□□ -2.07
USO1YDL058W VID22Q05934 901 aa2.12□□□□□ -2.07
USO1YDL058W NUT2Q06213 157 aa2.12□□□□□ -2.07
USO1YDL058W YOR059CQ08448 450 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W HFI1Q12060 488 aa2.12□□□□□ -2.07
USO1YDL058W HUA2Q12134 243 aa2.12□□□□□ -2.07
USO1YDL058W SPT3P06844 337 aa2.12□□□□□ -2.07
USO1YDL058W MGT1P26188 188 aa2.12□□□□□ -2.07
USO1YDL058W MSP1P28737 362 aa2.12□□□□□ -2.07
USO1YDL058W VPH1P32563 840 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W GCG1P32656 232 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W RMA1P36001 430 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W MCM7P38132 845 aa2.12□□□□□ -2.07
USO1YDL058W RFC3P38629 340 aa2.12□□□□□ -2.07
USO1YDL058W DED81P38707 554 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W BIM1P40013 344 aa2.12□□□□□ -2.07
USO1YDL058W LCP5P40079 357 aaPredicted RBP2.12□□□□□ -2.07
USO1YDL058W DLD2P46681 530 aaKnown RBP2.12□□□□□ -2.07
USO1YDL058W TRS85P46944 698 aa2.12□□□□□ -2.07
USO1YDL058W SSY5P47002 699 aa2.12□□□□□ -2.07
USO1YDL058W KEL2P50090 882 aa2.12□□□□□ -2.07
USO1YDL058W UBA2P52488 636 aa2.12□□□□□ -2.07
USO1YDL058W PPT1P53043 513 aa2.12□□□□□ -2.07
USO1YDL058W GUP1P53154 560 aa2.12□□□□□ -2.07
USO1YDL058W CAF120P53836 1060 aa2.12□□□□□ -2.07
USO1YDL058W SNZ1Q03148 297 aa2.12□□□□□ -2.07
USO1YDL058W TAF12Q03761 539 aa2.12□□□□□ -2.07
USO1YDL058W YDR338CQ05497 695 aa2.12□□□□□ -2.07
USO1YDL058W YLL007CQ07799 665 aa2.12□□□□□ -2.07
USO1YDL058W ENV9Q08651 330 aa2.12□□□□□ -2.07
USO1YDL058W GUP2Q08929 609 aa2.12□□□□□ -2.07
USO1YDL058W PGC1Q08959 321 aa2.12□□□□□ -2.07
USO1YDL058W ADE8P04161 214 aa2.11□□□□□ -2.07
USO1YDL058W SSC1P0CS90 654 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W NAM9P27929 486 aa2.11□□□□□ -2.07
USO1YDL058W CHS3P29465 1165 aa2.11□□□□□ -2.07
USO1YDL058W ACB1P31787 87 aa2.11□□□□□ -2.07
USO1YDL058W TBS1P38114 1094 aa2.11□□□□□ -2.07
USO1YDL058W PBP2P38151 413 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
USO1YDL058W FZO1P38297 855 aa2.11□□□□□ -2.07
USO1YDL058W COS111P38308 924 aa2.11□□□□□ -2.07
USO1YDL058W DIA4P38705 446 aaPredicted RBP2.11□□□□□ -2.07
USO1YDL058W DYS1P38791 387 aa2.11□□□□□ -2.07
USO1YDL058W YHR122WP38829 231 aa2.11□□□□□ -2.07
USO1YDL058W TIR3P40552 269 aa2.11□□□□□ -2.07
USO1YDL058W SPG5P42933 373 aa2.11□□□□□ -2.07
USO1YDL058W MET12P46151 657 aa2.11□□□□□ -2.07
USO1YDL058W YJL055WP47044 245 aa2.11□□□□□ -2.07
USO1YDL058W COX16P47081 118 aa2.11□□□□□ -2.07
USO1YDL058W GCV2P49095 1034 aa2.11□□□□□ -2.07
USO1YDL058W RPT4P53549 437 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W TEP1P53916 434 aa2.11□□□□□ -2.07
USO1YDL058W MFM1Q02783 413 aa2.11□□□□□ -2.07
USO1YDL058W PEX25Q02969 394 aa2.11□□□□□ -2.07
USO1YDL058W PDS5Q04264 1277 aa2.11□□□□□ -2.07
USO1YDL058W PEX12Q04370 399 aa2.11□□□□□ -2.07
USO1YDL058W TDA5Q06417 326 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W DIS3Q08162 1001 aaKnown RBP2.11□□□□□ -2.07
USO1YDL058W YRR1Q12172 810 aa2.11□□□□□ -2.07
USO1YDL058W DPH6Q12429 685 aa2.11□□□□□ -2.07
USO1YDL058W PDC1P06169 563 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 506.3 ms