RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	FHL1	P39521	936 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	HXT8	P40886	569 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	GUF1	P46943	645 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	BFA1	P47113	574 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	PSP1	P50896	841 aa	Known RBP	6.14	□□□□□ -1.43
ATG12	YBR217W	MTD1	Q02046	320 aa	Known RBP	6.14	□□□□□ -1.43
ATG12	YBR217W	NSE5	Q03718	556 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	ARO80	Q04052	950 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	YDR344C	Q05510	147 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	YPR148C	Q06523	435 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	MDM38	Q08179	573 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	HMI1	Q12039	706 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	EMP46	Q12396	444 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	FMP27	Q06179	2628 aa		6.14	□□□□□ -1.43
ATG12	YBR217W	RPS3	P05750	240 aa	Known RBP	6.13	□□□□□ -1.43
ATG12	YBR217W	DAL1	P32375	460 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	ISF1	P32488	338 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	DUG2	P38149	878 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	YBR225W	P38321	900 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	BTT1	P40314	149 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG12	YBR217W	YTA12	P40341	825 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	YAP5	P40574	245 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	STU2	P46675	888 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	VTC4	P47075	721 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	PUS2	P53167	370 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	LEE1	Q02799	301 aa	Known RBP	6.13	□□□□□ -1.43
ATG12	YBR217W	HRD3	Q05787	833 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	BSP1	Q06604	576 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	DIS3	Q08162	1001 aa	Known RBP	6.13	□□□□□ -1.43
ATG12	YBR217W	YOR059C	Q08448	450 aa	Known RBP	6.13	□□□□□ -1.43
ATG12	YBR217W	APL4	Q12028	832 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	SPE3	Q12074	293 aa	Known RBP	6.13	□□□□□ -1.43
ATG12	YBR217W	NBP2	Q12163	236 aa		6.13	□□□□□ -1.43
ATG12	YBR217W	BI2	P03873	423 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	BI4	P03879	638 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	KAR3	P17119	729 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	SIR1	P21691	654 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	PUP3	P25451	205 aa	Known RBP	6.12	□□□□□ -1.43
ATG12	YBR217W	DSS4	P32601	143 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	MRP4	P32902	394 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	MPE1	P35728	441 aa	Known RBP	6.12	□□□□□ -1.43
ATG12	YBR217W	YKL050C	P35736	922 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	YBR053C	P38235	358 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	YMR124W	P39523	943 aa	Known RBP	6.12	□□□□□ -1.43
ATG12	YBR217W	NUP60	P39705	539 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	ATG3	P40344	310 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	YDR222W	Q04925	415 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	TAF9	Q05027	157 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	BI3	Q9ZZW7	517 aa		6.12	□□□□□ -1.43
ATG12	YBR217W	AEP2	P22136	580 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	STE11	P23561	717 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	PPH22	P23595	377 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	RRP43	P25359	394 aa	Predicted RBP	6.11	□□□□□ -1.43
ATG12	YBR217W	SGF29	P25554	259 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	MCM2	P29469	868 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	LSB6	P42951	607 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
ATG12	YBR217W	RSM7	P47150	247 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	HOP2	P53187	214 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	YPL062W	Q02781	134 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	GYL1	Q04322	720 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	SPG3	Q04398	127 aa	Predicted RBP	6.11	□□□□□ -1.43
ATG12	YBR217W	IRC10	Q08118	586 aa		6.11	□□□□□ -1.43
ATG12	YBR217W	NEW1	Q08972	1196 aa	Known RBP	6.11	□□□□□ -1.43
ATG12	YBR217W	LPX1	Q12405	387 aa	Known RBP	6.11	□□□□□ -1.43
ATG12	YBR217W	MTF1	P14908	341 aa	Known RBP	6.1	□□□□□ -1.43
ATG12	YBR217W	RGR1	P19263	1082 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	SRB2	P34162	210 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	POL12	P38121	705 aa	Predicted RBP	6.1	□□□□□ -1.43
ATG12	YBR217W	NCL1	P38205	684 aa	Known RBP	6.1	□□□□□ -1.43
ATG12	YBR217W	MED6	P38782	295 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	SET5	P38890	526 aa	Known RBP	6.1	□□□□□ -1.43
ATG12	YBR217W	YER189W	P40104	122 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	PRK1	P40494	810 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	YNL144C	P53907	740 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	SFB2	P53953	876 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	ERG5	P54781	538 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	ELP3	Q02908	557 aa	Known RBP	6.1	□□□□□ -1.43
ATG12	YBR217W	YHM2	Q04013	314 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	OPY2	Q06810	360 aa		6.1	□□□□□ -1.43
ATG12	YBR217W	PDH1	Q12428	516 aa	Known RBP	6.1	□□□□□ -1.43
ATG12	YBR217W	RPS14A	P06367	137 aa	Known RBP	6.09	□□□□□ -1.43
ATG12	YBR217W	MTF2	P10849	440 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	EST1	P17214	699 aa	Predicted RBP	6.09	□□□□□ -1.43
ATG12	YBR217W	SPT5	P27692	1063 aa	Known RBP	6.09	□□□□□ -1.43
ATG12	YBR217W	PCH2	P38126	564 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	HSL7	P38274	827 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	TDA3	P38758	523 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	NMD3	P38861	518 aa	Known RBP	6.09	□□□□□ -1.43
ATG12	YBR217W	RPS14B	P39516	138 aa	Known RBP	6.09	□□□□□ -1.43
ATG12	YBR217W	YIL161W	P40449	235 aa	Known RBP	6.09	□□□□□ -1.43
ATG12	YBR217W	SNZ3	P43545	298 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	YGR111W	P53265	400 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	BIO5	P53744	561 aa	Known RBP	6.09	□□□□□ -1.43
ATG12	YBR217W	SNZ2	P53824	298 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	INA17	Q02888	182 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	TMN2	Q04562	672 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	SIL1	Q08199	421 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	AIM39	Q08223	395 aa		6.09	□□□□□ -1.43
ATG12	YBR217W	APC5	Q08683	685 aa		6.09	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms