RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	SIC1	P38634	284 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	SSZ1	P38788	538 aa	Known RBP	3.98	□□□□□ -1.77
CMD1	YBR109C	EXG2	P52911	562 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	BRE5	P53741	515 aa	Known RBP	3.98	□□□□□ -1.77
CMD1	YBR109C	ORC4	P54791	529 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	LEE1	Q02799	301 aa	Known RBP	3.98	□□□□□ -1.77
CMD1	YBR109C	PKH1	Q03407	766 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	TMA10	Q06177	86 aa		3.98	□□□□□ -1.77
CMD1	YBR109C	RPS21B	Q3E754	87 aa	Known RBP	3.98	□□□□□ -1.77
CMD1	YBR109C	DOP1	Q03921	1698 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	RPS21A	P0C0V8	87 aa	Known RBP	3.97	□□□□□ -1.77
CMD1	YBR109C	DAL3	P32459	195 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	OAF3	P36023	863 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	MAL31	P38156	614 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	BEM4	P39011	633 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	GPP2	P40106	250 aa	Known RBP	3.97	□□□□□ -1.77
CMD1	YBR109C	NIT2	P47016	307 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	YJR008W	P47085	338 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	MNN10	P50108	393 aa	Known RBP	3.97	□□□□□ -1.77
CMD1	YBR109C	HFI1	Q12060	488 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	LAS17	Q12446	633 aa		3.97	□□□□□ -1.77
CMD1	YBR109C	DNF2	Q12675	1612 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	AEP2	P22136	580 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	CAD1	P24813	409 aa	Known RBP	3.96	□□□□□ -1.78
CMD1	YBR109C	PLC1	P32383	869 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	NGG1	P32494	702 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	CTF13	P35203	478 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	GRX7	P38068	203 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	AKL1	P38080	1108 aa	Known RBP	3.96	□□□□□ -1.78
CMD1	YBR109C	RPP1	P38786	293 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	NUG1	P40010	520 aa	Known RBP	3.96	□□□□□ -1.78
CMD1	YBR109C	ATF1	P40353	525 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
CMD1	YBR109C	PRP31	P49704	494 aa	Predicted RBP	3.96	□□□□□ -1.78
CMD1	YBR109C	PEX14	P53112	341 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	PEX8	P53248	589 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	MRPS35	P53292	345 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	ERG5	P54781	538 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	YHM2	Q04013	314 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	TRM11	Q12463	433 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	APM4	Q99186	491 aa		3.96	□□□□□ -1.78
CMD1	YBR109C	SWI6	P09959	803 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	ADE2	P21264	571 aa	Known RBP	3.95	□□□□□ -1.78
CMD1	YBR109C	TFC4	P33339	1025 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	CAB3	P36076	571 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	APN2	P38207	520 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	FAT1	P38225	669 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	YBR259W	P38338	688 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	YHR202W	P38887	602 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	GID8	P40208	455 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	SET2	P46995	733 aa	Known RBP	3.95	□□□□□ -1.78
CMD1	YBR109C	YBP2	P53169	641 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	GPD1	Q00055	391 aa	Known RBP	3.95	□□□□□ -1.78
CMD1	YBR109C	ARG5,6	Q01217	863 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	PTA1	Q01329	785 aa	Predicted RBP	3.95	□□□□□ -1.78
CMD1	YBR109C	NRG1	Q03125	231 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	YDL144C	Q07589	356 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	ENB1	Q08299	606 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	RMP1	Q12530	201 aa		3.95	□□□□□ -1.78
CMD1	YBR109C	SEC65	P29478	273 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	SER1	P33330	395 aa	Known RBP	3.94	□□□□□ -1.78
CMD1	YBR109C	YKR075C	P36155	307 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	ECM1	P39715	212 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	YFR016C	P43597	1233 aa	Known RBP	3.94	□□□□□ -1.78
CMD1	YBR109C	ATG36	P46983	293 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	BFA1	P47113	574 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	MCM6	P53091	1017 aa	Known RBP	3.94	□□□□□ -1.78
CMD1	YBR109C	TGL2	P54857	326 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	YOL057W	Q08225	711 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	TGL5	Q12043	749 aa		3.94	□□□□□ -1.78
CMD1	YBR109C	CFT1	Q06632	1357 aa	Known RBP	3.93	□□□□□ -1.78
CMD1	YBR109C	IMG2	P25642	146 aa	Predicted RBP	3.93	□□□□□ -1.78
CMD1	YBR109C	DCG1	P32460	244 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	APL2	P36000	726 aa	Predicted RBP	3.93	□□□□□ -1.78
CMD1	YBR109C	BIT2	P38346	545 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	YHR112C	P38716	378 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	FKH2	P41813	862 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	YNL034W	P53963	612 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	YNL018C	P53976	612 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	SKY1	Q03656	742 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	HMO1	Q03973	246 aa	Known RBP	3.93	□□□□□ -1.78
CMD1	YBR109C	SND1	Q04007	877 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	YLR407W	Q06070	228 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	MCM21	Q06675	368 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	YPR027C	Q12079	277 aa		3.93	□□□□□ -1.78
CMD1	YBR109C	RVB2	Q12464	471 aa	Known RBP	3.93	□□□□□ -1.78
CMD1	YBR109C	TMA7	Q3E764	64 aa	Known RBP	3.93	□□□□□ -1.78
CMD1	YBR109C	PYC1	P11154	1178 aa	Known RBP	3.92	□□□□□ -1.78
CMD1	YBR109C	CLC1	P17891	233 aa		3.92	□□□□□ -1.78
CMD1	YBR109C	HEM12	P32347	362 aa	Predicted RBP	3.92	□□□□□ -1.78
CMD1	YBR109C	YKU70	P32807	602 aa		3.92	□□□□□ -1.78
CMD1	YBR109C	BUL1	P48524	976 aa		3.92	□□□□□ -1.78
CMD1	YBR109C	TEX1	P53851	422 aa	Known RBP	3.92	□□□□□ -1.78
CMD1	YBR109C	NOP15	P53927	220 aa	Predicted RBP	3.92	□□□□□ -1.78
CMD1	YBR109C	KIN4	Q01919	800 aa		3.92	□□□□□ -1.78
CMD1	YBR109C	ECM16	Q04217	1267 aa	Known RBP	3.92	□□□□□ -1.78
CMD1	YBR109C	YRF1-4	O13559	1382 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	YML133C	Q03099	1374 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	YLL067C	Q07888	1374 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	YLL066C	Q99208	1374 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 138.4 ms