RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CFHR5Q9BXR6 569 aa21.04■□□□□ 0.96
PHGDH-234ENST00000642041 DBNDD1Q9H9R9 158 aa21.04■□□□□ 0.96
PHGDH-234ENST00000642041 PAPPA2Q9BXP8 1791 aa21.03■□□□□ 0.96
PHGDH-234ENST00000642041 DUOX1Q9NRD9 1551 aa21.03■□□□□ 0.96
PHGDH-234ENST00000642041 A0A0C4DFX4 3053 aa21.03■□□□□ 0.96
PHGDH-234ENST00000642041 TCIRG1Q13488 830 aa21.03■□□□□ 0.96
PHGDH-234ENST00000642041 GRAPQ13588 217 aa21.03■□□□□ 0.96
PHGDH-234ENST00000642041 DDX46Q7L014 1031 aaKnown RBP21.03■□□□□ 0.96
PHGDH-234ENST00000642041 TMC4Q7Z404 712 aa21.03■□□□□ 0.96
PHGDH-234ENST00000642041 GRAPLQ8TC17 118 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-234ENST00000642041 COLQQ9Y215 455 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-234ENST00000642041 ASTN2O75129 1339 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-234ENST00000642041 SURF6O75683 361 aaKnown RBP21.02■□□□□ 0.96
PHGDH-234ENST00000642041 IGKV5-2P06315 115 aa21.02■□□□□ 0.96
PHGDH-234ENST00000642041 CEP290O15078 2479 aa21.02■□□□□ 0.96
PHGDH-234ENST00000642041 BRCA2P51587 3418 aa21.02■□□□□ 0.96
PHGDH-234ENST00000642041 CWF19L2Q2TBE0 894 aaKnown RBP21.01■□□□□ 0.95
PHGDH-234ENST00000642041 PLEKHM2Q8IWE5 1019 aa21.01■□□□□ 0.95
PHGDH-234ENST00000642041 GPATCH3Q96I76 525 aa21.01■□□□□ 0.95
PHGDH-234ENST00000642041 ISCA1Q9BUE6 129 aa21.01■□□□□ 0.95
PHGDH-234ENST00000642041 KCNQ5Q9NR82 932 aa21.01■□□□□ 0.95
PHGDH-234ENST00000642041 FBXO3Q9UK99 471 aa21.01■□□□□ 0.95
PHGDH-234ENST00000642041 RTL9Q8NET4 1388 aa21■□□□□ 0.95
PHGDH-234ENST00000642041 H7C1W4 665 aa21■□□□□ 0.95
PHGDH-234ENST00000642041 G3BP1Q13283 466 aaKnown RBP eCLIP21■□□□□ 0.956e-8■■■■□ 23.8
PHGDH-234ENST00000642041 CLASRPQ8N2M8 674 aaKnown RBP21■□□□□ 0.95
PHGDH-234ENST00000642041 PNMA6EA0A0J9YXQ4 647 aa20.99■□□□□ 0.95
PHGDH-234ENST00000642041 UBE2Q2LH0YL09 131 aa20.99■□□□□ 0.95
PHGDH-234ENST00000642041 ECE2O60344 883 aa20.99■□□□□ 0.95
PHGDH-234ENST00000642041 VIL1P09327 827 aaKnown RBP20.99■□□□□ 0.95
PHGDH-234ENST00000642041 RABL6Q3YEC7 729 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-234ENST00000642041 ANGEL2Q5VTE6 544 aaKnown RBP20.99■□□□□ 0.95
PHGDH-234ENST00000642041 MOB2Q70IA6 237 aa20.99■□□□□ 0.95
PHGDH-234ENST00000642041 IPO9Q96P70 1041 aaKnown RBP20.99■□□□□ 0.95
PHGDH-234ENST00000642041 R3HDMLQ9H3Y0 253 aa20.99■□□□□ 0.95
PHGDH-234ENST00000642041 STAP2Q9UGK3 403 aa20.99■□□□□ 0.95
PHGDH-234ENST00000642041 RBBP6Q7Z6E9 1792 aaKnown RBP20.99■□□□□ 0.95
PHGDH-234ENST00000642041 LAMB2P55268 1798 aa20.98■□□□□ 0.95
PHGDH-234ENST00000642041 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
PHGDH-234ENST00000642041 RIMBP2O15034 1052 aa20.98■□□□□ 0.95
PHGDH-234ENST00000642041 CDC45O75419 566 aa20.98■□□□□ 0.95
PHGDH-234ENST00000642041 SREBF2Q12772 1141 aa20.98■□□□□ 0.95
PHGDH-234ENST00000642041 OS9Q13438 667 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-234ENST00000642041 SCARF1Q14162 830 aa20.98■□□□□ 0.95
PHGDH-234ENST00000642041 TTC22Q5TAA0 569 aa20.98■□□□□ 0.95
PHGDH-234ENST00000642041 ERC2O15083 957 aa20.97■□□□□ 0.95
PHGDH-234ENST00000642041 EPB41L2O43491 1005 aaKnown RBP20.97■□□□□ 0.95
PHGDH-234ENST00000642041 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
PHGDH-234ENST00000642041 TICAM2Q86XR7 235 aa20.97■□□□□ 0.95
PHGDH-234ENST00000642041 RHPN1Q8TCX5 695 aa20.97■□□□□ 0.95
PHGDH-234ENST00000642041 NSFL1CQ9UNZ2 370 aaKnown RBP20.97■□□□□ 0.95
PHGDH-234ENST00000642041 TRIM17Q9Y577 477 aa20.97■□□□□ 0.95
PHGDH-234ENST00000642041 TTC41PQ6P2S7 1318 aa20.97■□□□□ 0.95
PHGDH-234ENST00000642041 LRRC37AA6NMS7 1700 aa20.96■□□□□ 0.95
PHGDH-234ENST00000642041 CUL9Q8IWT3 2517 aa20.96■□□□□ 0.95
PHGDH-234ENST00000642041 EN2P19622 333 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-234ENST00000642041 ZNF280AP59817 542 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-234ENST00000642041 DOK7Q18PE1 504 aa20.96■□□□□ 0.95
PHGDH-234ENST00000642041 COPRSQ9NQ92 184 aa20.96■□□□□ 0.95
PHGDH-234ENST00000642041 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-234ENST00000642041 POLLQ9UGP5 575 aa20.96■□□□□ 0.95
PHGDH-234ENST00000642041 PITPNM2Q9BZ72 1349 aa20.96■□□□□ 0.95
PHGDH-234ENST00000642041 TAF1P21675 1872 aa20.96■□□□□ 0.95
PHGDH-234ENST00000642041 C6orf229H3BNL8 230 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 MX1P20591 662 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 PDE1AP54750 535 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 OTOP1Q7RTM1 612 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 NLRP10Q86W26 655 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 EYA3Q99504 573 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 PLA2G12BQ9BX93 195 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 EXOC6BQ9Y2D4 811 aa20.95■□□□□ 0.94
PHGDH-234ENST00000642041 PCCAP05165 728 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-234ENST00000642041 SLC17A8Q8NDX2 589 aa20.94■□□□□ 0.94
PHGDH-234ENST00000642041 SUCLG2Q96I99 432 aa20.94■□□□□ 0.94
PHGDH-234ENST00000642041 DDX60Q8IY21 1712 aaKnown RBP20.93■□□□□ 0.94
PHGDH-234ENST00000642041 ALDH1A1P00352 501 aa20.93■□□□□ 0.94
PHGDH-234ENST00000642041 MKRN3Q13064 507 aaKnown RBP20.93■□□□□ 0.94
PHGDH-234ENST00000642041 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
PHGDH-234ENST00000642041 BICC1Q9H694 974 aaKnown RBP20.93■□□□□ 0.94
PHGDH-234ENST00000642041 BECN1Q14457 450 aa20.92■□□□□ 0.94
PHGDH-234ENST00000642041 UBE3BQ7Z3V4 1068 aa20.92■□□□□ 0.94
PHGDH-234ENST00000642041 ZBTB38Q8NAP3 1195 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-234ENST00000642041 AGBL3Q8NEM8 1001 aa20.92■□□□□ 0.94
PHGDH-234ENST00000642041 ARMC5Q96C12 935 aa20.92■□□□□ 0.94
PHGDH-234ENST00000642041 OTUD5Q96G74 571 aa20.92■□□□□ 0.94
PHGDH-234ENST00000642041 SCN9AQ15858 1988 aa20.92■□□□□ 0.94
PHGDH-234ENST00000642041 ZNF609O15014 1411 aa20.91■□□□□ 0.94
PHGDH-234ENST00000642041 CASP7P55210 303 aa20.91■□□□□ 0.94
PHGDH-234ENST00000642041 TTLL12Q14166 644 aaPredicted RBP20.91■□□□□ 0.94
PHGDH-234ENST00000642041 PTPN22Q9Y2R2 807 aa20.91■□□□□ 0.94
PHGDH-234ENST00000642041 SH3TC1Q8TE82 1336 aa20.9■□□□□ 0.94
PHGDH-234ENST00000642041 GLRX3O76003 335 aaKnown RBP20.9■□□□□ 0.94
PHGDH-234ENST00000642041 REC8O95072 547 aa20.9■□□□□ 0.94
PHGDH-234ENST00000642041 GPSM2P81274 684 aa20.9■□□□□ 0.94
PHGDH-234ENST00000642041 TRMT112Q9UI30 125 aaKnown RBP20.9■□□□□ 0.94
PHGDH-234ENST00000642041 RANBP2P49792 3224 aaKnown RBP20.89■□□□□ 0.94
PHGDH-234ENST00000642041 SALL3Q9BXA9 1300 aa20.89■□□□□ 0.93
PHGDH-234ENST00000642041 IFIT2P09913 472 aaKnown RBP20.89■□□□□ 0.93
PHGDH-234ENST00000642041 RSBN1LQ6PCB5 846 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-234ENST00000642041 TBC1D16Q8TBP0 767 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms