RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 TBC1D16Q8TBP0 767 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 HMMRO75330 724 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 FDX1P10109 184 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 PRELPP51888 382 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 PLCB2Q00722 1185 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 SPTY2D1Q68D10 685 aaPredicted RBP8.08□□□□□ -1.12
RTTN-215ENST00000639487 WDR66Q8TBY9 1149 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 MAP3K20Q9NYL2 800 aaKnown RBP8.08□□□□□ -1.12
RTTN-215ENST00000639487 ANKRD18BA2A2Z9 1011 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 GNAT2P19087 354 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 ERFEQ4G0M1 354 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 LDLRAD1Q5T700 205 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 APOBEC3FQ8IUX4 373 aaKnown RBP8.07□□□□□ -1.12
RTTN-215ENST00000639487 OSBPL5Q9H0X9 879 aaPredicted RBP8.07□□□□□ -1.12
RTTN-215ENST00000639487 PATJQ8NI35 1801 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 IRS4O14654 1257 aaPredicted RBP8.07□□□□□ -1.12
RTTN-215ENST00000639487 A1BGP04217 495 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 MMP10P09238 476 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 PRMT2P55345 433 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 GSTO1P78417 241 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 CCDC178Q5BJE1 867 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 KIF1BPQ96EK5 621 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 SUCLG2Q96I99 432 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 ADAMTS5Q9UNA0 930 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 KCNH4Q9UQ05 1017 aa8.07□□□□□ -1.12
RTTN-215ENST00000639487 MSH5O43196 834 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 COPB2P35606 906 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 SPDYE2Q495Y8 402 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 TATDN1Q6P1N9 297 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 SIRT2Q8IXJ6 389 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 HELLSQ9NRZ9 838 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 APBB1O00213 710 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 SASH1O94885 1247 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 PRPF40BQ6NWY9 871 aaKnown RBP8.06□□□□□ -1.12
RTTN-215ENST00000639487 MORC4Q8TE76 937 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 PAPLNO95428 1278 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 PLCG2P16885 1265 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 RPS8P62241 208 aaKnown RBP8.06□□□□□ -1.12
RTTN-215ENST00000639487 GABPAQ06546 454 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 RSBN1LQ6PCB5 846 aaPredicted RBP8.06□□□□□ -1.12
RTTN-215ENST00000639487 CENPQQ7L2Z9 268 aaPredicted RBP8.06□□□□□ -1.12
RTTN-215ENST00000639487 MKL1Q969V6 931 aa8.06□□□□□ -1.12
RTTN-215ENST00000639487 BCCIPQ9P287 314 aaKnown RBP eCLIP8.06□□□□□ -1.12
RTTN-215ENST00000639487 NAP1L2Q9ULW6 460 aaPredicted RBP8.06□□□□□ -1.12
RTTN-215ENST00000639487 CA12O43570 354 aa8.05□□□□□ -1.12
RTTN-215ENST00000639487 LRRFIP1Q32MZ4 808 aaKnown RBP8.05□□□□□ -1.12
RTTN-215ENST00000639487 DDX54Q8TDD1 881 aaKnown RBP8.05□□□□□ -1.12
RTTN-215ENST00000639487 WDR18Q9BV38 432 aa8.05□□□□□ -1.12
RTTN-215ENST00000639487 ADARB2Q9NS39 739 aaKnown RBP8.05□□□□□ -1.12
RTTN-215ENST00000639487 ZBTB48P10074 688 aaPredicted RBP8.05□□□□□ -1.12
RTTN-215ENST00000639487 MSL3Q8N5Y2 521 aaKnown RBP8.05□□□□□ -1.12
RTTN-215ENST00000639487 PI4K2BQ8TCG2 481 aa8.05□□□□□ -1.12
RTTN-215ENST00000639487 NOB1Q9ULX3 412 aaKnown RBP8.05□□□□□ -1.12
RTTN-215ENST00000639487 KCTD17Q8N5Z5 321 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 ATG2AQ2TAZ0 1938 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 HOXA7P31268 230 aaPredicted RBP8.04□□□□□ -1.12
RTTN-215ENST00000639487 ZNF804AQ7Z570 1209 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 C2CD5Q86YS7 1000 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 TFCP2L1Q9NZI6 479 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 DENND4AQ7Z401 1863 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 ORC4O43929 436 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 G2E3Q7L622 706 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 CLUAP1Q96AJ1 413 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 SWAP70Q9UH65 585 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 KIAA1549LQ6ZVL6 1849 aa8.04□□□□□ -1.12
RTTN-215ENST00000639487 DPEP1P16444 411 aa8.03□□□□□ -1.12
RTTN-215ENST00000639487 YBX3P16989 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
RTTN-215ENST00000639487 PPP2R5BQ15173 497 aa8.03□□□□□ -1.12
RTTN-215ENST00000639487 ANKRD18AQ8IVF6 992 aa8.03□□□□□ -1.12
RTTN-215ENST00000639487 NIP7Q9Y221 180 aaKnown RBP eCLIP8.03□□□□□ -1.12
RTTN-215ENST00000639487 MROH7-TTC4A0A0A0MT08 1334 aa8.03□□□□□ -1.12
RTTN-215ENST00000639487 TM4SF4P48230 202 aa8.03□□□□□ -1.12
RTTN-215ENST00000639487 BMP2KLQ5H9B9 411 aa8.03□□□□□ -1.12
RTTN-215ENST00000639487 PHAXQ9H814 394 aaKnown RBP8.03□□□□□ -1.12
RTTN-215ENST00000639487 TLL2Q9Y6L7 1015 aa8.03□□□□□ -1.12
RTTN-215ENST00000639487 OAZ1P54368 228 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 INHBEP58166 350 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 ZSCAN25Q6NSZ9 544 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 DSCC1Q9BVC3 393 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 DHX36Q9H2U1 1008 aaKnown RBP8.02□□□□□ -1.13
RTTN-215ENST00000639487 HERC5Q9UII4 1024 aaKnown RBP8.02□□□□□ -1.13
RTTN-215ENST00000639487 RBM19Q9Y4C8 960 aaKnown RBP8.02□□□□□ -1.13
RTTN-215ENST00000639487 ANAPC15P60006 121 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 ORC2Q13416 577 aaPredicted RBP8.02□□□□□ -1.13
RTTN-215ENST00000639487 TRMT44Q8IYL2 757 aaKnown RBP8.02□□□□□ -1.13
RTTN-215ENST00000639487 TAOK3Q9H2K8 898 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 GPRC5DQ9NZD1 345 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 CCDC171Q6TFL3 1326 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 PRAMEF22A3QJZ6 481 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 hCG_1984214I3L0E3 225 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 KIF3CO14782 793 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 SLC39A6Q13433 755 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 DDX46Q7L014 1031 aaKnown RBP8.02□□□□□ -1.13
RTTN-215ENST00000639487 ZNF713Q8N859 430 aaPredicted RBP8.02□□□□□ -1.13
RTTN-215ENST00000639487 TM6SF1Q9BZW5 370 aa8.02□□□□□ -1.13
RTTN-215ENST00000639487 GPSM2P81274 684 aa8.01□□□□□ -1.13
RTTN-215ENST00000639487 TNNI3KQ59H18 835 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms