RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 F8W031 263 aaPredicted RBP13.57□□□□□ -0.24
SSBP4-215ENST00000625926 PDE8BO95263 885 aa13.57□□□□□ -0.24
SSBP4-215ENST00000625926 FKBP1BP68106 108 aa13.57□□□□□ -0.24
SSBP4-215ENST00000625926 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
SSBP4-215ENST00000625926 VPS37DQ86XT2 251 aa13.57□□□□□ -0.24
SSBP4-215ENST00000625926 TDRD7Q8NHU6 1098 aaKnown RBP13.57□□□□□ -0.24
SSBP4-215ENST00000625926 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
SSBP4-215ENST00000625926 ZBED3Q96IU2 234 aaPredicted RBP13.57□□□□□ -0.24
SSBP4-215ENST00000625926 SCAF8Q9UPN6 1271 aaKnown RBP13.57□□□□□ -0.24
SSBP4-215ENST00000625926 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
SSBP4-215ENST00000625926 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
SSBP4-215ENST00000625926 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
SSBP4-215ENST00000625926 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
SSBP4-215ENST00000625926 ZNF157P51786 506 aaPredicted RBP13.56□□□□□ -0.24
SSBP4-215ENST00000625926 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
SSBP4-215ENST00000625926 CAVIN4Q5BKX8 364 aa13.56□□□□□ -0.24
SSBP4-215ENST00000625926 PRAMEF18Q5VWM3 479 aa13.56□□□□□ -0.24
SSBP4-215ENST00000625926 FBXO33Q7Z6M2 555 aa13.56□□□□□ -0.24
SSBP4-215ENST00000625926 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
SSBP4-215ENST00000625926 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
SSBP4-215ENST00000625926 FAM205AQ6ZU69 1335 aa13.56□□□□□ -0.24
SSBP4-215ENST00000625926 PDE4DIPQ5VU43 2346 aa13.55□□□□□ -0.24
SSBP4-215ENST00000625926 EYA2O00167 538 aa13.55□□□□□ -0.24
SSBP4-215ENST00000625926 CA12O43570 354 aa13.55□□□□□ -0.24
SSBP4-215ENST00000625926 NF2P35240 595 aa13.55□□□□□ -0.24
SSBP4-215ENST00000625926 RFX5P48382 616 aaPredicted RBP13.55□□□□□ -0.24
SSBP4-215ENST00000625926 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
SSBP4-215ENST00000625926 MFSD14BQ5SR56 506 aa13.55□□□□□ -0.24
SSBP4-215ENST00000625926 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
SSBP4-215ENST00000625926 FAM155AB1AL88 458 aaPredicted RBP13.54□□□□□ -0.24
SSBP4-215ENST00000625926 MYO1BO43795 1136 aa13.54□□□□□ -0.24
SSBP4-215ENST00000625926 IFIT1P09914 478 aaKnown RBP13.54□□□□□ -0.24
SSBP4-215ENST00000625926 RBM5P52756 815 aaKnown RBP eCLIP13.54□□□□□ -0.24
SSBP4-215ENST00000625926 PTPN12Q05209 780 aaKnown RBP13.54□□□□□ -0.24
SSBP4-215ENST00000625926 PUM3Q15397 648 aaKnown RBP13.54□□□□□ -0.24
SSBP4-215ENST00000625926 CFAP100Q494V2 611 aa13.54□□□□□ -0.24
SSBP4-215ENST00000625926 INTS3Q68E01 1043 aaKnown RBP13.54□□□□□ -0.24
SSBP4-215ENST00000625926 ZIC5Q96T25 663 aa13.54□□□□□ -0.24
SSBP4-215ENST00000625926 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
SSBP4-215ENST00000625926 SCN9AQ15858 1988 aa13.53□□□□□ -0.24
SSBP4-215ENST00000625926 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
SSBP4-215ENST00000625926 FRAT2O75474 233 aaPredicted RBP13.53□□□□□ -0.24
SSBP4-215ENST00000625926 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
SSBP4-215ENST00000625926 KIF23Q02241 960 aaPredicted RBP13.53□□□□□ -0.24
SSBP4-215ENST00000625926 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
SSBP4-215ENST00000625926 FRAT1Q92837 279 aaPredicted RBP13.53□□□□□ -0.24
SSBP4-215ENST00000625926 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
SSBP4-215ENST00000625926 DEFB129Q9H1M3 183 aa13.53□□□□□ -0.24
SSBP4-215ENST00000625926 TTF2Q9UNY4 1162 aaKnown RBP13.53□□□□□ -0.24
SSBP4-215ENST00000625926 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
SSBP4-215ENST00000625926 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 BCAR3O75815 825 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 CIAO1O76071 339 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 GNAI3P08754 354 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 SLC10A3P09131 477 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 FGFR2P21802 821 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 BCAMP50895 628 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 MOB2Q70IA6 237 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 ATG9AQ7Z3C6 839 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 TBC1D22AQ8WUA7 517 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 LPIN2Q92539 896 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 MEIS3Q99687 375 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 SERPINA10Q9UK55 444 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 IQSEC3Q9UPP2 1182 aaPredicted RBP13.52□□□□□ -0.25
SSBP4-215ENST00000625926 PCDHAC2Q9Y5I4 1007 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 CACNA1FO60840 1977 aa13.52□□□□□ -0.25
SSBP4-215ENST00000625926 SLC5A1P13866 664 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 TRIM27P14373 513 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
SSBP4-215ENST00000625926 ATF7IPQ6VMQ6 1270 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 ARMC9Q7Z3E5 817 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
SSBP4-215ENST00000625926 SIL1Q9H173 461 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 CEP126Q9P2H0 1117 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 MYH3P11055 1940 aa13.51□□□□□ -0.25
SSBP4-215ENST00000625926 CLRN2A0PK11 232 aa13.5□□□□□ -0.25
SSBP4-215ENST00000625926 IL15P40933 162 aaPredicted RBP13.5□□□□□ -0.25
SSBP4-215ENST00000625926 RGS19P49795 217 aa13.5□□□□□ -0.25
SSBP4-215ENST00000625926 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
SSBP4-215ENST00000625926 VEZTQ9HBM0 779 aa13.5□□□□□ -0.25
SSBP4-215ENST00000625926 COPRSQ9NQ92 184 aa13.5□□□□□ -0.25
SSBP4-215ENST00000625926 HDLBPQ00341 1268 aaKnown RBP13.49□□□□□ -0.25
SSBP4-215ENST00000625926 PRKG1Q13976 671 aa13.49□□□□□ -0.25
SSBP4-215ENST00000625926 SUPT20HL1Q3ZLR7 823 aa13.49□□□□□ -0.25
SSBP4-215ENST00000625926 ZKSCAN2Q63HK3 967 aa13.49□□□□□ -0.25
SSBP4-215ENST00000625926 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
SSBP4-215ENST00000625926 CLUAP1Q96AJ1 413 aa13.49□□□□□ -0.25
SSBP4-215ENST00000625926 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
SSBP4-215ENST00000625926 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
SSBP4-215ENST00000625926 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 CRKP46108 304 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 GRIK5Q16478 980 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 ATP2B3Q16720 1220 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 MRIQ9BWK5 157 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
SSBP4-215ENST00000625926 GNL3LQ9NVN8 582 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms